pengyuanli / PDFigCapXLinks
https://doi.org/10.1093/bioinformatics/btz228
☆42Updated 10 months ago
Alternatives and similar repositories for PDFigCapX
Users that are interested in PDFigCapX are comparing it to the libraries listed below
Sorting:
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆209Updated last year
- Tools to scrape publications & their metadata from pubmed, arxiv, medrxiv, biorxiv and chemrxiv.☆414Updated last month
- Python PDF parser for scientific publications: content and figures☆433Updated last year
- Code and data for the publication "Structured information extraction from scientific text with large language models" by Dagdelen & Dunn …☆113Updated last year
- [ISMB 2024] Self-BioRAG: Improving Medical Reasoning through Retrieval and Self-Reflection with Retrieval-Augmented Large Language Models☆64Updated last year
- LitQA Eval: A difficult set of scientific questions that require context of full-text research papers to answer☆42Updated 9 months ago
- Biomedical Question Answering Datasets.☆114Updated 5 months ago
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆70Updated last year
- A data set based on all arXiv publications, pre-processed for NLP, including structured full-text and citation network☆296Updated last year
- A specialized LLM for study search, study screening, and data extraction from medical literature.☆13Updated 6 months ago
- PubMedQA: A Dataset for Biomedical Research Question Answering☆371Updated 2 years ago
- AIONER☆61Updated last year
- Parsers for scientific papers (PDF2JSON, TEX2JSON, JATS2JSON)☆439Updated last year
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆196Updated last year
- Unofficial Python client library for Semantic Scholar APIs.☆405Updated 2 weeks ago
- This repository contains ScholarQABench data and evaluation pipeline.☆85Updated last month
- This is Clinfo.AI Demo Instruction☆37Updated last year
- ☆30Updated last year
- Biomedical Named Entity Recognition and Normalization of Diseases, Chemicals and Genenetic entity classes through the use of state-of-the…☆121Updated 3 years ago
- Bioformer: an efficient BERT model for biomedical text mining☆55Updated 2 years ago
- Code and data for MedQA☆312Updated 2 years ago
- Public space for the user community of Semantic Scholar APIs to share scripts, report issues, and make suggestions.☆242Updated 8 months ago
- A large-scale (194k), Multiple-Choice Question Answering (MCQA) dataset designed to address realworld medical entrance exam questions.☆235Updated 2 years ago
- ☆25Updated last year
- Get answers to research questions from 200M+ papers. Link to demo -☆206Updated last year
- Medical reasoning using large language models☆90Updated last year
- Repository for training LLaMa 2 models using the NERRE format.☆61Updated last year
- all scripts used in gatortron project☆123Updated last year
- ☆28Updated 2 years ago
- Tools for curating biomedical training data for large-scale language modeling☆484Updated 9 months ago