cunni / ldr
code for Cunningham and Ghahramani (2015), Journal of Machine Learning Research
☆26Updated 8 years ago
Alternatives and similar repositories for ldr:
Users that are interested in ldr are comparing it to the libraries listed below
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆37Updated 5 years ago
- This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …☆18Updated 7 years ago
- Train excitatory-inhibitory recurrent neural networks for cognitive tasks.☆49Updated 8 years ago
- CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations☆19Updated 3 years ago
- Interpretable neural spike train models with fully-Bayesian inference algorithms☆47Updated 6 years ago
- Recordings of 10k neurons during spontaneous behaviors☆50Updated 10 months ago
- Dimensionality reduction of spikes trains☆49Updated 3 years ago
- Matlab codepack for performing dimensionality reduction on neural data using TD-GPFA or GPFA.☆19Updated 7 years ago
- ☆50Updated 4 years ago
- Python tools for analysis of neurophysiology data☆36Updated last year
- MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting softwar…☆43Updated 5 years ago
- Tools for spike data analysis and visualization☆104Updated 2 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆44Updated 5 years ago
- Neural Spike Train Analysis Toolbox for Matlab☆34Updated 7 years ago
- Calculate phase-amplitude coupling in Python (and Matlab).☆24Updated 7 years ago
- Extracting neuronal functional network dynamics via adaptive Granger causality analysis☆18Updated 6 years ago
- Accompanying code for Aljadeff et al., 'Analysis of Neuronal Spike Trains, Deconstructed', Neuron (2016)☆10Updated 8 years ago
- Pytorch implementation of lfads, and hierarchical extension☆26Updated 3 years ago
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆28Updated 2 years ago
- Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains☆64Updated last year
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 2 months ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆68Updated 4 years ago
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆49Updated 3 years ago
- Tutorial☆10Updated 4 years ago
- Automatic spike sorting, cluster visualization, spike sorting GUIs☆44Updated last year
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆19Updated 7 years ago
- Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)☆12Updated 10 years ago
- non-parametric inference for convolutional filters in poisson glms☆13Updated 3 years ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆38Updated 6 months ago
- latent manifold tuning model / P-GPLVM☆12Updated 5 years ago