Code for fitting neural spike trains with nonparametric hidden Markov and semi-Markov models built upon mattjj's PyHSMM framework.
☆16Aug 10, 2018Updated 8 years ago
Alternatives and similar repositories for pyhsmm_spiketrains
Users that are interested in pyhsmm_spiketrains are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Revealing neural correlates of behavior without behavioral measurements☆18Nov 18, 2019Updated 6 years ago
- Website for the MIT/Harvard Computational Neuroscience Journal Club☆11Apr 7, 2025Updated last year
- My PhD Thesis☆22May 13, 2016Updated 10 years ago
- autoregressive plugin☆28Nov 3, 2022Updated 3 years ago
- Code for Krause and Drugowitsch (2022). "A large majority of awake hippocampal sharp-wave ripples feature spatial trajectories with momen…☆16Apr 18, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- changepoint detection for Bayesian models☆19Nov 7, 2014Updated 11 years ago
- Interpretable neural spike train models with fully-Bayesian inference algorithms☆48Jul 19, 2018Updated 8 years ago
- Pseudo-Marginal Slice Sampling☆19Jun 8, 2016Updated 10 years ago
- lazyarray is a Python package that provides a lazily-evaluated numerical array class, larray, based on and compatible with NumPy arrays.☆22May 19, 2026Updated 3 months ago
- Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains☆72Jul 18, 2023Updated 3 years ago
- Functional matrix factorization via Bayesian tensor filtering☆13Oct 1, 2025Updated 11 months ago
- Kernel Current Source Density☆25Jun 26, 2024Updated 2 years ago
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆37Aug 22, 2025Updated last year
- ☆10Jan 12, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This repository contains the main scripts for local linear segmentation and subsequent analysis of the resulting model space☆15Oct 8, 2020Updated 5 years ago
- Fast Exact Spike Inference Via L0 Optimization☆16Jun 10, 2020Updated 6 years ago
- Variational Sparse Spectrum Gaussian Process toolkit☆22Apr 7, 2015Updated 11 years ago
- Analytical methods for efficient inference of integrate-and-fire circuit models from single-trial spike trains☆11Oct 30, 2019Updated 6 years ago
- Neuroproc dataset descriptions and dictionaries☆17Jan 2, 2017Updated 9 years ago
- SpikeShip: A method for fast, unsupervised discovery of high-dimensional neural spiking patterns.☆21Apr 18, 2024Updated 2 years ago
- a repository containing everything relevant to our fast non-negative deconvolution work☆35Nov 28, 2016Updated 9 years ago
- Tree-structured recurrent switching linear dynamical systems☆39Jul 13, 2020Updated 6 years ago
- Hierarchical Change-Point Detection☆17Oct 25, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- imaging, spike trains, information theory, neural circuitry, synaptic, channel properties☆12May 13, 2023Updated 3 years ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆72May 12, 2020Updated 6 years ago
- Library of common tools for machine learning research.☆41Nov 20, 2017Updated 8 years ago
- ☆17Jul 20, 2016Updated 10 years ago
- ☆14Jan 11, 2023Updated 3 years ago
- Accompanying code for Aljadeff et al., 'Analysis of Neuronal Spike Trains, Deconstructed', Neuron (2016)☆11Jul 25, 2016Updated 10 years ago
- pyqt5 based GUI for multi web camera video recordings☆19Nov 24, 2020Updated 5 years ago
- Estimating the dimensionality of neural data using Shared Variance Component Analysis (SVCA)☆13Nov 13, 2024Updated last year
- Implementation of Aligned Cluster Analysis☆18Sep 29, 2018Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Region Of Interest Classification and Tracking☆40Updated this week
- ☆16Jul 24, 2026Updated last month
- Public repository for the work on bandit problems☆24Apr 4, 2024Updated 2 years ago
- Partial set of hardware designs for a Meta-developed brain computer interface (BCI) research prototype system (Spotlight).☆17Mar 23, 2023Updated 3 years ago
- Reproduction of Curiosity-driven Exploration by Self-supervised Prediction in PyTorch☆12Jun 10, 2019Updated 7 years ago
- Variational Bayesian GP-LVM model in MATLAB.☆12Jun 8, 2015Updated 11 years ago
- Generalized linear models for neural spike train modeling, in Python! With GPU-accelerated fully-Bayesian inference, MAP inference, and n…☆45Oct 14, 2014Updated 11 years ago