Code for fitting neural spike trains with nonparametric hidden Markov and semi-Markov models built upon mattjj's PyHSMM framework.
☆15Aug 10, 2018Updated 7 years ago
Alternatives and similar repositories for pyhsmm_spiketrains
Users that are interested in pyhsmm_spiketrains are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Website for the MIT/Harvard Computational Neuroscience Journal Club☆11Apr 7, 2025Updated last year
- My PhD Thesis☆22May 13, 2016Updated 10 years ago
- autoregressive plugin☆27Nov 3, 2022Updated 3 years ago
- changepoint detection for Bayesian models☆19Nov 7, 2014Updated 11 years ago
- Code for Krause and Drugowitsch (2022). "A large majority of awake hippocampal sharp-wave ripples feature spatial trajectories with momen…☆15Apr 18, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Python implementation of fast-oopsi, smc-oopsi, wiener, and discretize with binning☆15May 17, 2022Updated 4 years ago
- Time-varying Autoregression with Low Rank Tensors☆16Jul 29, 2021Updated 4 years ago
- Pseudo-Marginal Slice Sampling☆19Jun 8, 2016Updated 10 years ago
- lazyarray is a Python package that provides a lazily-evaluated numerical array class, larray, based on and compatible with NumPy arrays.☆22May 19, 2026Updated last month
- Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains☆72Jul 18, 2023Updated 2 years ago
- Functional matrix factorization via Bayesian tensor filtering☆13Oct 1, 2025Updated 9 months ago
- Region Of Interest Classification and Tracking☆37Updated this week
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆37Aug 22, 2025Updated 10 months ago
- This repository contains the main scripts for local linear segmentation and subsequent analysis of the resulting model space☆15Oct 8, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Analytical methods for efficient inference of integrate-and-fire circuit models from single-trial spike trains☆11Oct 30, 2019Updated 6 years ago
- This repository provides analysis code to analyze intracranial electrophysiological data with data-driven spatial filters.☆21Sep 2, 2021Updated 4 years ago
- Variational Sparse Spectrum Gaussian Process toolkit☆22Apr 7, 2015Updated 11 years ago
- imaging, spike trains, information theory, neural circuitry, synaptic, channel properties☆12May 13, 2023Updated 3 years ago
- Tree-structured recurrent switching linear dynamical systems☆39Jul 13, 2020Updated 5 years ago
- SpikeShip: A method for fast, unsupervised discovery of high-dimensional neural spiking patterns.☆21Apr 18, 2024Updated 2 years ago
- ☆26Dec 6, 2023Updated 2 years ago
- Neuroproc dataset descriptions and dictionaries☆16Jan 2, 2017Updated 9 years ago
- Hierarchical Change-Point Detection☆17Oct 25, 2018Updated 7 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆73May 12, 2020Updated 6 years ago
- Example analyses making extensive use of nelpy.☆10May 1, 2019Updated 7 years ago
- Accompanying code for Aljadeff et al., 'Analysis of Neuronal Spike Trains, Deconstructed', Neuron (2016)☆11Jul 25, 2016Updated 9 years ago
- Library of common tools for machine learning research.☆41Nov 20, 2017Updated 8 years ago
- CoNNECT: Convolutional Neural Network for Estimating synaptic Connectivity from spike Trains. Endo et al., bioRxiv (2020).☆14Aug 12, 2022Updated 3 years ago
- Bunch of experiments with Transformers, BERT and GPT-2. Experiments include question-answering and conditional text generation.☆12Sep 11, 2020Updated 5 years ago
- Partial set of hardware designs for a Meta-developed brain computer interface (BCI) research prototype system (Spotlight).☆17Mar 23, 2023Updated 3 years ago
- Saxena et al., 2018. Inexpensive, scalable camera system for tracking rats in large spaces☆15Jul 21, 2018Updated 7 years ago
- Machine Learning Methods for Neural Data Analysis☆21May 16, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Convolutive Matrix Factorization in Julia☆10Mar 7, 2021Updated 5 years ago
- ☆28Aug 15, 2022Updated 3 years ago
- ☆15Updated this week
- Fast Exact Spike Inference Via L0 Optimization☆16Jun 10, 2020Updated 6 years ago
- ☆12Jan 11, 2023Updated 3 years ago
- Public repository for the work on bandit problems☆24Apr 4, 2024Updated 2 years ago
- Tutorial☆11Jan 25, 2021Updated 5 years ago