Alternatives and similar repositories for PyHRM:

Users that are interested in PyHRM are comparing it to the libraries listed below

• hms-dbmi / chromoscope
  Interactive multiscale visualization for structural variation in human genomes
  ☆67Updated last week
• hsinnan75 / GSAlign
  GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison
  ☆56Updated 9 months ago
• gladstone-institutes / Interactive-Enrichment-Analysis
  A set of Shiny apps to provide interactive enrichment analysis and exploration of results.
  ☆28Updated last week
• urmi-21 / orfipy
  Fast and flexible ORF finder
  ☆69Updated 3 years ago
• LKremer / showTree
  showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.
  ☆30Updated 5 years ago
• rvolden / C3POa
  Computational pipeline for calling consensi on R2C2 nanopore data
  ☆31Updated 2 years ago
• dbikard / genomenotebook
  A genome browser in your Jupyter notebook
  ☆30Updated 2 months ago
• niemasd / ViralMSA
  Reference-guided multiple sequence alignment of viral genomes
  ☆65Updated last month
• Kuanhao-Chao / splam
  ✂️ Deep learning-based splice site predictor that improves spliced alignments
  ☆46Updated last month
• santiago1234 / iCodon
  iCodon customizes gene expression based on the codon composition
  ☆14Updated last year
• DMU-lilab / pTrimmer
  Used to trim off the primer sequence from mutiplex amplicon sequencing
  ☆21Updated last year
• Stephane-S / Simplot_PlusPlus
  ☆31Updated last year
• rvolden / Mandalorion-Episode-II
  Version II of Mandalorion
  ☆32Updated 6 years ago
• PedroMTQ / mantis
  A package to annotate protein sequences
  ☆55Updated last week
• thekaplanlab / msabrowser
  🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations
  ☆31Updated 9 months ago
• epi2me-labs / wf-clone-validation
  ☆29Updated last week
• zichner / primerDesign
  A tool to design highly specific PCR primers for the validation of genomic alterations including structural variants
  ☆45Updated 7 years ago
• qhtjrmin / GPrimer
  GPrimer: a fast GPU-based pipeline for primerdesign for qPCR experiments
  ☆10Updated 2 years ago
• pinellolab / CRISPRitz
  Tool package to perform in-silico CRISPR analysis and assessment
  ☆22Updated 9 months ago
• mckennalab / Circuitseq
  Nanopore Plasmid Sequencing
  ☆32Updated last year
• Edinburgh-Genome-Foundry / Geneblocks
  Find common blocks and differences between DNA sequences
  ☆40Updated 2 years ago
• jsh58 / NGmerge
  Merging paired-end reads and removing adapters
  ☆44Updated 4 years ago
• IOB-Muenster / nanopipe2
  The NanoPipe pipeline analyzes reads generated by the Oxford Nanopore sequencing devices. As a result, it provides alignments to any targ…
  ☆18Updated 6 years ago
• labomics / MetaLogo
  MetaLogo: a heterogeneity-aware sequence logo generator and aligner
  ☆20Updated last year
• ponnhide / PySanger
  A Python module to analyze Sanger sequencing results.
  ☆24Updated last year
• mourisl / Rcorrector
  Error correction for Illumina RNA-seq reads
  ☆65Updated 11 months ago
• crisprVerse / crisprScore
  On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
  ☆16Updated 4 months ago
• guyleonard / get_jgi_genomes
  A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.
  ☆32Updated 5 months ago
• jrjhealey / bioinfo-tools
  Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.
  ☆58Updated 4 years ago
• aakechin / NGS-PrimerPlex
  NGS-PrimerPlex is a high-throughput tool for mupltiplex primer design
  ☆55Updated last year