linewalks / mimic-fhir
☆15Updated this week
Related projects: ⓘ
- Corresponding code for experiments described in "Predicting Clinical Outcomes Across Changing Electronic Health Records." Presented at KD…☆11Updated 7 years ago
- Real time mortality prediction in the MIMIC-III database☆52Updated 6 years ago
- Code for "Trajectory Inspection: A Method for Iterative Clinician-Driven Design of Reinforcement Learning Studies"☆16Updated 3 years ago
- ACT COVID Ontology☆15Updated 2 years ago
- Installing MIMIC-IV in a local Postgres database☆34Updated 3 years ago
- ☆13Updated 6 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆66Updated last year
- Publication: Linked electronic health records for research on a nationwide cohort including over 54 million people in England☆18Updated last year
- Time-Sensitive Deep Learning for ICU Outcome Prediction Without Variable Selection or Cleaning.☆18Updated 4 years ago
- Tools for working with icd codes and comorbidities☆27Updated 3 years ago
- Cookbook of sql scripts for MIMIC-II☆17Updated 8 years ago
- Mapping the MIMIC-III database to the OMOP schema☆125Updated 6 months ago
- An R package for evaluating phenotype algorithms.☆17Updated 2 weeks ago
- [in development]☆37Updated 3 years ago
- Code for doing machine learning with various EHRs☆21Updated last year
- The Simple EMR System is a rapidly deployable and readily customizable electronic medical record (EMR) user interface for supporting labo…☆18Updated 2 months ago
- InspectOmop is a lightweight python 3 package that assists in the extraction of electronic health record(EHR) data from relational databa…☆13Updated 4 months ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆83Updated 3 months ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆20Updated 3 years ago
- Python package for machine learning for healthcare using a OMOP common data model☆103Updated last year
- Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records☆24Updated 3 years ago
- Sample code that demonstrates the use of the NCBO REST services☆40Updated 8 months ago
- ☆35Updated 4 months ago
- Evaluating the reproducibility of mortality prediction studies in the MIMIC-III database☆37Updated 6 years ago
- queries for mimic-iv☆10Updated 3 years ago
- Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction☆31Updated 5 years ago
- Jupyter Notebooks and other code for 4CE data visualizations.☆12Updated last year
- PIC (Pediatric Intensive Care) database☆38Updated last year
- This is the source code for the paper 'Analysis and Prediction of Unplanned Intensive Care Unit Readmission'☆31Updated 6 years ago
- ☆28Updated last year