Python scripts for automation of work within 3D Slicer
☆21Sep 13, 2024Updated 2 years ago
Alternatives and similar repositories for 3D-Slicer-Scripts
Users that are interested in 3D-Slicer-Scripts are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Simple Scripted Module to batch process patients in 3D Slicer☆18Jun 26, 2025Updated last year
- Example extension for 3D Slicer that demonstrates how to make a Python script available as a CLI module☆20Feb 28, 2024Updated 2 years ago
- Examples of simple application-specific workflows implemented using 3D Slicer☆11Nov 8, 2020Updated 5 years ago
- 3D Slicer modules for brain segmentation using deep learning.☆33Mar 5, 2024Updated 2 years ago
- ☆20Jun 17, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Appscript to pull stats from gmail and store in a google sheet☆10Mar 20, 2021Updated 5 years ago
- 3D Slicer nnUNet integration to streamline usage for nnUNet based AI extensions.☆71Jul 29, 2026Updated last month
- Inkscape Extension for Origami diagramming☆12Feb 1, 2020Updated 6 years ago
- A tutorial for the free Inkscape cross-platform vector graphics editor.☆13Oct 4, 2016Updated 9 years ago
- Browser-based version of FreeView, built on top of niivue☆24Sep 14, 2026Updated last week
- Write PubMed search results with two display options (citation or listview) to PDF or Word☆13Oct 18, 2020Updated 5 years ago
- CIVET Installer☆32Jan 29, 2022Updated 4 years ago
- Covid19 Dashboard India☆12Feb 27, 2021Updated 5 years ago
- A Minimum Viable Data Format for using R as a front-end for the Blender 3D Rendering Engine☆17May 3, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Create a Windows installable exe from a PyVistaQt application☆17Aug 31, 2026Updated 3 weeks ago
- ☆14Feb 22, 2023Updated 3 years ago
- google chrome extension for saving svg dom elements for use in drawing packages (basically d3 --> inkscape)☆15Jul 22, 2021Updated 5 years ago
- Interactive electron optical simulation of a TEM☆13Nov 24, 2025Updated 9 months ago
- How to process 3D scans in Meshlab☆11Sep 17, 2020Updated 6 years ago
- Spectral Imaging and Electron Energy Loss Spectroscopy Analysis☆10Mar 5, 2018Updated 8 years ago
- Collection of utilities that are not polished implementations but can be useful to users☆104Jul 8, 2026Updated 2 months ago
- 3D Slicer extension to visualize and plan an osteotomy surgery.☆12Mar 15, 2022Updated 4 years ago
- A program interfacing Segment Anything with cryoSPARC via cryosparc-tools to efficiently identify vesicle-embedded membrane proteins and …☆18Feb 18, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Blender application template simulating degrees of freedom in a focused ion beam system☆10Sep 3, 2021Updated 5 years ago
- Template respository with Django and React+ThreeJs for 3D browser development & complex UI☆13Feb 20, 2021Updated 5 years ago
- blender_lifting is a Blender addon that implements the functionality from Denis Tome' research paper Lifting from the Deep: Convolutional…☆16May 12, 2021Updated 5 years ago
- Materials for the yearly PerkLab bootcamp course☆98Jul 29, 2025Updated last year
- Slicer extension for TOMAAT☆18Jun 18, 2024Updated 2 years ago
- Dimensionality reduction (UMAP, t-SNE, PCA) for ImageJ/Fiji☆12May 6, 2025Updated last year
- A Hyperspy extension package for processing and reconstructing electron tomography data☆17Sep 2, 2026Updated 2 weeks ago
- 3D Slicer extension to create tube or closed surface model from markup fiducials☆16May 14, 2026Updated 4 months ago
- Tools and Methods for Kikuchi Diffraction☆15Nov 19, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Modified version of MultiStackRegistration, for use from scripts.☆12May 18, 2022Updated 4 years ago
- FaceFusion for Automatic1111, brought to you by RunDiffusion☆21Aug 25, 2025Updated last year
- CryoSPARC is the state-of-the-art platform used globally for obtaining 3D structural information from single particle cryo-EM data. The …☆16May 4, 2026Updated 4 months ago
- Browser-based GUI HDF Viewer https://broh5.readthedocs.io☆15Dec 26, 2025Updated 8 months ago
- ☆16Updated this week
- Semi automated image analysis toolkit for Connectomics☆12Aug 21, 2019Updated 7 years ago
- ☆14Nov 3, 2021Updated 4 years ago