lassoan / SlicerSegmentationRecipesLinks
Recipes for common medical image segmentation tasks using 3D Slicer
☆58Updated 3 years ago
Alternatives and similar repositories for SlicerSegmentationRecipes
Users that are interested in SlicerSegmentationRecipes are comparing it to the libraries listed below
Sorting:
- Brain vessel segmentation using 3D convolutional neural networks☆43Updated 3 years ago
- This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.☆55Updated 2 weeks ago
- Many additional segmentation tools for 3D Slicer's Segment Editor☆50Updated 8 months ago
- Implementation of the DeepVesselNet deep learning network☆151Updated 2 years ago
- ☆109Updated last week
- Materials for the yearly PerkLab bootcamp course☆95Updated 3 weeks ago
- Website for NA-MIC Project Weeks☆91Updated last week
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆76Updated last year
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆54Updated 5 months ago
- Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix☆51Updated 5 months ago
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆89Updated last month
- This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.☆83Updated 10 months ago
- 💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model☆69Updated 10 months ago
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆39Updated 5 years ago
- DICOM RT-Struct to mask☆101Updated last year
- ☆88Updated last year
- A project to provide custom sorting and renaming of dicom files☆78Updated 3 months ago
- Computes vesselness scores for 3-dimensional images.☆71Updated 8 years ago
- Medical Image Radiomics Processor☆71Updated last week
- General deep learning-based fast image registration framework for clinical thoracic 4D CT data☆40Updated 6 years ago
- Extension for 3D Slicer for running MONAI Auto3DSeg models☆94Updated last month
- A segmentation network for intracranial aneurysm on CTA images using pytorch☆43Updated 2 years ago
- Very fast greedy diffeomorphic registration code☆80Updated 3 months ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆105Updated 2 weeks ago
- A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proce…☆29Updated 3 years ago
- ITK-Based Implementation of Two-Projection 2D/3D Registration Method with an Application in Patient Setup for External Beam Radiotherapy☆54Updated 5 months ago
- The code in this repository is from my master thesis. This project aims to automatically segment carotid from 3D MR brain image, and use …☆29Updated 4 years ago
- Collection of utilities that are not polished implementations but can be useful to users☆87Updated last month
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆42Updated last month
- Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and Simpl…☆101Updated 8 months ago