NIH-MIP / Radiology_Image_Preprocessing_for_Deep_Learning
A Quick Guide on Radiology Image Pre-processing for Deep Learning Applications in Prostate Cancer Research
☆24Updated last year
Alternatives and similar repositories for Radiology_Image_Preprocessing_for_Deep_Learning:
Users that are interested in Radiology_Image_Preprocessing_for_Deep_Learning are comparing it to the libraries listed below
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.☆82Updated 2 years ago
- Hand-crafted radiomics and deep learning-based radiomcis features extraction.☆82Updated 2 years ago
- This repository is mainly dedicated for listing the recent research advancements in the application of Self-Supervised-Learning in medica…☆150Updated 7 months ago
- Annotations for the PI-CAI Challenge: Public Training and Development Dataset☆57Updated 6 months ago
- A package to compute medical segmentation metrics.☆155Updated 8 months ago
- This Repo containes the implemnetation of generating Guided-GradCAM for 3D medical Imaging using Nifti file in tensorflow 2.0. Different …☆104Updated 4 years ago
- Workflow for Optimal Radiomics Classification☆74Updated 3 weeks ago
- This Repo Will contain the Preprocessing Code for 3D Medical Imaging☆198Updated 4 years ago
- Visualization for radiomics feature generated by pyradiomics☆47Updated 2 months ago
- primakov / DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-imagesRepository supporting the original research paper in Nature Communications (Primakov et al. 2022)☆76Updated 8 months ago
- Precision medicine toolbox☆69Updated 11 months ago
- The official repository of the 2021 Kidney and Kidney Tumor Segmentation Challenge☆174Updated last year
- [Nature Machine Intelligence 2024] Code and evaluation repository for the paper☆103Updated 2 weeks ago
- The official repository of the 2023 Kidney Tumor Segmentation Challenge (KiTS23)☆96Updated 3 weeks ago
- Hierarchical probabilistic 3D U-Net, with attention mechanisms (—𝘈𝘵𝘵𝘦𝘯𝘵𝘪𝘰𝘯 𝘜-𝘕𝘦𝘵, 𝘚𝘌𝘙𝘦𝘴𝘕𝘦𝘵) and a nested decoder str…☆40Updated 3 years ago
- DICOM RT-Struct to mask☆101Updated last year
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆86Updated 5 months ago
- Model for the detection, segmentation, and classification of prostate lesions from mpMRI, using ProstateX data and Retina U-Net☆66Updated 3 years ago
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆62Updated 4 years ago
- ☆40Updated last year
- ☆147Updated 6 months ago
- ☆34Updated 7 months ago
- ☆30Updated last year
- MRI Brain Tumor Segmentation - BraTS Challenge 2020☆49Updated 3 years ago
- Predicting genetics and providing segmentation of glioma☆18Updated 7 months ago
- This repo is the source code for [BiTr-Unet: a CNN-Transformer Combined Network for MRI Brain Tumor Segmentation].☆32Updated 2 years ago
- Segmentation deep learning ALgorithm based on MONai toolbox: single and multi-label segmentation software developed by QIMP team-Vienna.☆121Updated 3 years ago
- ☆76Updated last year
- 3D-Unet: patched based Pytorch implementation for medical images segmentation☆63Updated 3 years ago
- A complete pipeline for BraTS 2020☆55Updated 2 years ago