Library for diffusion maps
☆52Dec 22, 2021Updated 4 years ago
Alternatives and similar repositories for pyDiffMap
Users that are interested in pyDiffMap are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Fast computation of diffusion maps and geometric harmonics in Python. Moved to https://git.sr.ht/~jmbr/diffusion-maps☆43Jul 27, 2021Updated 5 years ago
- C++ Accelerated Python Diffusion Maps Library☆24Aug 28, 2018Updated 8 years ago
- ☆10Sep 16, 2020Updated 6 years ago
- Locally-Scaled Diffusion Maps, DM-d-MD☆12May 12, 2016Updated 10 years ago
- A deep learning-based framework to uniquely identify an uncorrelated, isometric and meaningful latent representation.☆19Sep 12, 2023Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Diffusion map based embedding and alignment☆70Mar 2, 2022Updated 4 years ago
- Spectral Gap Optimization of Parameters☆18Mar 28, 2020Updated 6 years ago
- Demo of diffusion models #DDPM applied to molecular dynamics of small peptide☆14Jan 26, 2024Updated 2 years ago
- MDAnalysis tool to calculate membrane curvature.☆37Updated this week
- Example files for Colvars module: https://github.com/Colvars/colvars☆14Dec 7, 2021Updated 4 years ago
- CCT3: A PSI4 plugin which performs active-space coupled-cluster CCSDt calculations and which can determine non-iterative corrections to C…☆13Oct 25, 2023Updated 2 years ago
- Convenience functions for VMD-TCL scripting☆14Apr 3, 2026Updated 6 months ago
- Implementation of the EMUS algorithm for recombining multiple biased data sources in python☆14Mar 9, 2024Updated 2 years ago
- Implementation of Implicit Graphon Neural Representation☆14Sep 1, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Main repository for METAGUI3☆22Jun 19, 2021Updated 5 years ago
- Automatic Mutual Information Noise Omission☆16Oct 8, 2024Updated 2 years ago
- Implementation of a machine learned density functional☆39Jun 17, 2024Updated 2 years ago
- Spectral Alignment of Graphs☆11Mar 26, 2017Updated 9 years ago
- MaxEnt code for fitting simulation outcomes/statistical models to observations☆18Jun 28, 2022Updated 4 years ago
- C++ implementation of the Diffusion Map, with Python bindings☆10Aug 22, 2017Updated 9 years ago
- Automated workflow to predict multireference character of molecules in quantum chemistry calculation☆23Nov 3, 2022Updated 3 years ago
- Symplectic integration of Hamiltonian systems. Zymplectic is a pre-compiled GUI and engine with 2D/3D-graphics bundled with more than 100…☆16Sep 28, 2026Updated last week
- Multiscale earth mover's distance methods for tree and manifold structured data☆13Mar 8, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Graph Learning from Data☆36Nov 5, 2019Updated 6 years ago
- Persistence differentiation with Gudhi and Tensorflow☆20Sep 28, 2023Updated 3 years ago
- Get access to our MD data files.☆34Nov 22, 2023Updated 2 years ago
- Bipartite Configuration Model for Python☆16Dec 10, 2020Updated 5 years ago
- ☆22Mar 10, 2021Updated 5 years ago
- This repository contains code used for the fly brain activity experiments☆18Apr 26, 2023Updated 3 years ago
- ☆34May 31, 2023Updated 3 years ago
- Collective variables by artificial neural networks☆11Mar 16, 2022Updated 4 years ago
- Machine learning for molecular dynamics☆13Jan 9, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code corresponding to the paper Diffusion Earth Mover's Distance and Distribution Embeddings☆38Nov 29, 2024Updated last year
- Dynamic Histogram Analysis To Determine Free Energies and Rates from Biased Simulations☆23Mar 13, 2018Updated 8 years ago
- Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion☆19Feb 8, 2024Updated 2 years ago
- ☆12Aug 26, 2024Updated 2 years ago
- Surface segregation using Deep Reinforcement Learning☆13Aug 30, 2021Updated 5 years ago
- Main code repository for FATSLiM☆23Feb 13, 2022Updated 4 years ago
- Tutorials of few enhanced sampling methods along with bash script to run the method in a single shot..☆49Feb 11, 2021Updated 5 years ago