ethanzhao9 / ImageJ-Tutorial
Supplementary for my ImageJ Tutorial
☆80Updated 3 months ago
Related projects: ⓘ
- A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data☆126Updated this week
- Multiple-particle tracking designed to (1) track dense particle fields, (2) close gaps in particle trajectories resulting from detection …☆45Updated last week
- ☆43Updated 2 months ago
- A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images☆53Updated 2 years ago
- CellProfiler tutorial pipelines and images☆81Updated last week
- Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools a…☆125Updated last month
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆26Updated this week
- A tool for cell instance aware segmentation in densely packed 3D volumetric images☆90Updated this week
- ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.☆38Updated last week
- ImageJ macros and scripts written at the imaging facility MRI☆29Updated this week
- Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more☆121Updated 2 weeks ago
- The U-Net Segmentation plugin for Fiji (ImageJ)☆86Updated last year
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆58Updated 4 years ago
- The ImageJ plugin to run deep-learning models☆83Updated 2 months ago
- ☆25Updated 2 years ago
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆68Updated last week
- Omnipose: a high-precision solution for morphology-independent cell segmentation☆93Updated last week
- StarDist plugin for ImageJ☆27Updated 2 years ago
- Fiji library to perform image segmentation based on the Weka learning schemes☆108Updated 5 months ago
- Use ImageJ from Python☆467Updated last month
- ☆22Updated 9 months ago
- A python algorithm for tracking cells in 3D time lapse images.☆50Updated 3 weeks ago
- Open source Python library for building bioimage analysis pipelines☆122Updated this week
- Cloud-based data annotation tools for biological images☆73Updated 7 months ago
- Microscope control software☆65Updated 11 months ago
- STORM movie analysis code☆113Updated 6 months ago
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆130Updated 4 years ago
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆119Updated 2 weeks ago
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆52Updated 4 years ago
- ☆21Updated 3 years ago