cytoscape / cy-jupyterlab
Jupyter lab widget for rendering graphs (networks)
☆24Updated 2 years ago
Alternatives and similar repositories for cy-jupyterlab:
Users that are interested in cy-jupyterlab are comparing it to the libraries listed below
- Cytoscape.js based network visualizer for Jupyter Notebook☆38Updated 2 years ago
- ☆27Updated 5 years ago
- Package Installer (pip) UI for JupyterLab☆24Updated 2 years ago
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data☆16Updated last year
- %conda magic for IPython☆28Updated 7 years ago
- visJS2jupyter is a tool to bring the interactivity of networks created with vis.js into jupyter notebook cells☆78Updated last year
- Snakemake-like pipeline manager for reproducible Jupyter Notebooks☆17Updated 3 years ago
- A light weight conda interface library☆15Updated 9 years ago
- Toolkit for constructing, analyzing, and visualizing data-driven ontologies☆18Updated 5 years ago
- Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML☆27Updated last year
- Cytoscape.js API support in JS, Python, and R Jupyter kernels☆10Updated 7 years ago
- A status bar for JupyterLab☆49Updated 6 years ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆26Updated 2 months ago
- Python utilities for Cytoscape and Cytoscape.js☆178Updated 2 years ago
- Starborn: Seaborn-compatible data visualization for Python based on Altair☆50Updated 6 years ago
- Plasma is an e-learning Jupyter-based platform for data analysis☆42Updated 10 months ago
- Create cwl workflows by writing a simple Python script☆40Updated 4 years ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Updated 6 months ago
- A Jupyter wrapper for the igv.js library (representation of genomic data)☆26Updated 3 years ago
- A python module for the clustergrammer matrix visualization project that creates the JSON object for the front-end JavaScript portion of …☆12Updated 3 years ago
- Jupyterlab Extensions for the Impatient☆38Updated last year
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 5 months ago
- How to navigate Jupyter's configuration system☆16Updated 5 years ago
- IPython running in a docker container. This image can be used to integrate IPython into Galaxy☆17Updated 8 years ago
- cyREST examples for Python users.☆11Updated 6 years ago
- Starter notebooks and directories in JupyterLab☆36Updated last year
- Commenting and annotation for JupyterLab☆103Updated 3 years ago
- DEPRECATED: replaced by linkml☆23Updated 3 years ago
- HiView: the universal viewer for hierarchical data☆16Updated last year