Alternatives and similar repositories for Bioinformatics-Programming-using-Python:

Users that are interested in Bioinformatics-Programming-using-Python are comparing it to the libraries listed below

• AAnzel / MOVIS
  MOVIS: A Multi-Omics Software Solution for Multi-modal Time-Series Clustering, Embedding, and Visualizing Tasks, by Aleksandar Anžel, Dom…
  ☆10Updated 2 years ago
• AlexsLemonade / RNA-Seq-Exercises
  Exercises for training scientists to perform some RNA-seq analyses.
  ☆11Updated 5 years ago
• pamelarussell / github-bioinformatics
  Code for Russell et al. "A large-scale analysis of bioinformatics code on GitHub"
  ☆31Updated 5 years ago
• aws-samples / aws-gatk-recipe-nextflow-pipeline
  ☆11Updated 3 years ago
• lmweber / Rtsne-example
  Short example showing how to calculate and plot a 2D t-SNE projection from mass cytometry data in R
  ☆17Updated 9 years ago
• genepattern / genepattern-notebook
  Platform for integrating genomic analysis with Jupyter Notebooks.
  ☆44Updated 6 months ago
• burkesquires / immunology-informatics
  Immunology Informatics - Big Data Analysis in Immunology - Tutorials
  ☆21Updated 7 years ago
• hammerlab / cohorts
  Utilities for analyzing mutations and neoepitopes in patient cohorts
  ☆20Updated 6 years ago
• openvax / pepdata
  Python interface to amino acid properties and IEDB
  ☆55Updated 4 months ago
• staciawyman / blender
  This BLENDER has been sunsetted
  ☆16Updated 4 months ago
• loosolab / UROPA
  Universal RObust Peak Annotator
  ☆15Updated last year
• gmcvicker / genome
  Python library and scripts for retrieval and storage of genomics data in HDF5 format
  ☆26Updated 5 years ago
• Shamir-Lab / NEMO
  ☆16Updated 4 years ago
• aquaskyline / Skyhawk
  An Artificial Neural Network-based discriminator for validating clinically significant genomic variants
  ☆35Updated last year
• Ensembl / postgap
  Linking GWAS studies to genes through cis-regulatory datasets
  ☆39Updated 2 years ago
• Serulab / Py4Bio
  Public data for the book Python for Bioinformatics
  ☆70Updated 4 years ago
• VCCRI / Falco
  A quick and flexible single-cell RNA-seq processing framework on the cloud
  ☆38Updated 5 years ago
• michaelbarton / bioinformatics-career-survey
  Survey of bioinformatics field
  ☆26Updated 12 years ago
• bio-tools / biotoolsRegistry
  biotoolsregistry : discovery portal for bioinformatics
  ☆72Updated last week
• ICGC-TCGA-PanCancer / dkfz_dockered_workflows
  This is the container that houses the Roddy-based component provided by DKFZ for the DEWrapper workflow
  ☆9Updated 5 years ago
• brentp / python-giggle
  python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.
  ☆16Updated 7 years ago
• diskin-lab-chop / AutoGVP
  ☆21Updated this week
• pinellolab / haystack_bio
  Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline
  ☆46Updated 2 years ago
• liulab-dfci / CHIPS
  A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data
  ☆19Updated 3 years ago
• biothings / myvariant.py
  Python client for MyVariant.info web services.
  ☆22Updated last month
• boutroslab / caRpools
  Exploratory data analysis for pooled CRISPR/Cas9 screens
  ☆21Updated 7 years ago
• allielarocco / Microarray-Analysis
  Microarray Analysis Pipeline in Python
  ☆19Updated 5 years ago
• broadinstitute / genepy
  Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python
  ☆20Updated last year
• openvax / topiary
  Predict mutated T-cell epitopes from sequencing data
  ☆27Updated this week