EpiModel / EpiModelHIV
Network Models of HIV Transmission Dynamics among MSM and Heterosexuals
☆25Updated 2 years ago
Alternatives and similar repositories for EpiModelHIV:
Users that are interested in EpiModelHIV are comparing it to the libraries listed below
- R package for deriving social mixing matrices from survey data.☆38Updated 2 months ago
- Inferring high-resolution human mixing patterns for disease modeling☆45Updated 2 years ago
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Updated 2 years ago
- Gallery of Network-Based Epidemic Model Templates for EpiModel☆53Updated 4 months ago
- An R package with Dynamic Models of infectious diseases☆29Updated 3 months ago
- Updates to the synthetic contact matrices☆36Updated last year
- SEIR transmission model of COVID-19. Documentation at:☆51Updated last year
- Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.☆17Updated 2 months ago
- ☆31Updated last week
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Updated last year
- FluSight Forecast Submissions☆18Updated 9 months ago
- ☆23Updated 4 years ago
- Modelling transmission dynamics of COVID-19, while accounting for presymptomatic infectiousness, time-varying ascertainment rates, transm…☆21Updated 4 years ago
- Code for reconstructing influenza dynamics from surveillance data using evidence synthesis techniques☆20Updated 2 years ago
- An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…☆37Updated 2 years ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated 2 years ago
- ☆40Updated 7 months ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆120Updated this week
- Extract raw underlying data from PDF figures☆56Updated last year
- European Covid-19 Forecast Hub.☆48Updated 3 months ago
- Flu Scenario Modeling Hub☆10Updated this week
- ☆19Updated last month
- Repo for the LSHTM R Users Group (RUG)☆9Updated 3 years ago
- A R statistical software package for estimating attributable influenza morbidity & mortality☆12Updated 5 years ago
- Bayesian estimation of Rt (C code)☆13Updated 4 years ago
- repository for the bipartite R-package for network analysis☆37Updated last month
- Implication of overdispersed transmission of COVID-19 on the effectiveness of contact tracing☆8Updated 4 years ago
- Tools to enable flexible and efficient hierarchical nowcasting of epidemiological time-series using a semi-mechanistic Bayesian model wit…☆61Updated 2 weeks ago
- In this work, we use S-gene target failure (SGTF) as a proxy of variant status combined with reported case counts to explore the evidence…☆15Updated 2 years ago
- ☆19Updated 2 years ago