bifold-pathomics / xMILLinks
xMIL: Insightful Explanations for Multiple Instance Learning in Histopathology
☆21Updated 6 months ago
Alternatives and similar repositories for xMIL
Users that are interested in xMIL are comparing it to the libraries listed below
Sorting:
- [ICLR 2025] Stem: Gene Expression Inference from Histology Images☆37Updated 4 months ago
- A Vision-Language Benchmark for Microscopy Understanding☆26Updated 5 months ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆81Updated 10 months ago
- Multimodal prototyping for cancer survival prediction - ICML 2024☆91Updated 6 months ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆106Updated 10 months ago
- ☆72Updated 3 months ago
- A vision language model for gigapixel whole slide images in histopathology☆73Updated 2 months ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆103Updated 7 months ago
- Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024☆139Updated 6 months ago
- TCGA Pathology Reports in Machine Readable Text☆48Updated last year
- A foundation model framework for analyzing multiplexed tissue imaging data across molecular, cellular and tissue scales enabling clinical…☆33Updated 6 months ago
- Data and code to accompany our Nature publication☆46Updated 3 years ago
- Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., Med…☆157Updated last year
- List of pathology feature extractors and foundation models☆149Updated 2 months ago
- Code of "Bayes-MIL: A New Probabilistic Perspective on Attention-based Multiple Instance Learning for Whole Slide Images" - ICLR 2023☆20Updated last year
- ☆14Updated 5 months ago
- Standardized benchmark for computational pathology foundation models.☆96Updated 3 weeks ago
- Integrating histology and spatial transcriptomics - NeurIPS 2024☆303Updated this week
- Demographic bias in misdiagnosis by computational pathology models - Nature Medicine☆13Updated last year
- Python 3 library for the augmentation & normalization of H&E images☆58Updated 2 years ago
- Efficient Approach for Guided Local Examination in Digital Pathology☆25Updated 4 months ago
- GrandQC tool for tissue detection and quality control in pathology☆61Updated 5 months ago
- MADELEINE: multi-stain slide representation learning (ECCV'24)☆59Updated 6 months ago
- machine-readable information for the TCGA dataset, mirrored from other sources☆20Updated 3 years ago
- This repository contains the official implementation of the research paper: "Towards Training Large-Scale Pathology Foundation Models: fr…☆33Updated 7 months ago
- A biologically interpretable graph neural network for multistain computational pathology - CVPR 2025☆19Updated 3 months ago
- Visual foundation model enabling rapid, accurate detection of brain tumor infiltration during surgery☆31Updated 7 months ago
- A tool for rapidly labeling objects using deep learning feature embedding☆33Updated last week
- Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024☆145Updated 9 months ago
- Self-Supervised Vision Transformers Learn Visual Concepts in Histopathology (LMRL Workshop, NeurIPS 2021)☆140Updated 3 years ago