baaihealth / OpenComplexLinks
Trainable PyTorch framework for developing protein, RNA and complex models.
☆261Updated 11 months ago
Alternatives and similar repositories for OpenComplex
Users that are interested in OpenComplex are comparing it to the libraries listed below
Sorting:
- Official code repository of < CBGBench: Fill in the Blank of Protein-Molecule Complex Binding Graph >☆310Updated last month
- AFusion: AlphaFold 3 GUI & Toolkit with Visualization☆159Updated last month
- This repository is the official code source of PPFlow: Target-Aware Peptide Design with Torsional Flow Matching (ICML2024)☆83Updated 5 months ago
- [Briefings In Bioinformatics] DrugAssist: A Large Language Model for Molecule Optimization☆136Updated 7 months ago
- Contrastive learning of structure-activity relationship☆44Updated last month
- Source code for ICLR2025 paper "NExT-Mol: 3D Diffusion Meets 1D Language Modeling for 3D Molecule Generation".☆89Updated 2 months ago
- Code for EMNLP2023 paper "MolCA: Molecular Graph-Language Modeling with Cross-Modal Projector and Uni-Modal Adapter".☆82Updated last year
- This is the official code of the paper "MolNexTR: a generalized deep learning model for molecular image recognition"☆146Updated last week
- Source code for ACL 2024 paper: "ProtT3: Protein-to-Text Generation for Text-based Protein Understanding"☆46Updated last year
- GENERator: A Long-Context Generative Genomic Foundation Model☆434Updated last week
- ☆167Updated last year
- [AAAI 2025] Dynamic Protein Data Bank☆770Updated 2 months ago
- A Local Frame-based Atomistic Potential☆111Updated last week
- Few-Shot Graph Learning for Molecular Property Prediction☆138Updated 2 years ago
- An open-source project dedicated to build foundational large language model for natural science, mainly in physics, chemistry and materia…☆244Updated 8 months ago
- [ICML 2025] Implementation of "GNN+ (ModernGNN): Can Classic GNNs Be Strong Baselines for Graph-level Tasks?"☆83Updated 2 months ago
- ☆44Updated 7 months ago
- SSAlign☆45Updated 2 months ago
- Variational Autoencoder (VAE)-based molecular SMILES string generator☆13Updated 6 months ago
- Electron-density-informed effective and reliable de novo molecular design and optimization with ED2Mol☆119Updated last month
- The official implementation of GenomeOcean.☆137Updated 2 weeks ago
- A PyTorch-based system for highly accurate drug-target interaction predictions utilizing multi-modal large language models to discern str…☆34Updated last year
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆215Updated 3 months ago
- The Family of Diffusion Protein Language Models (DPLM)☆273Updated 3 months ago
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆95Updated 6 months ago
- The official code for "TaxDiff: Taxonomic-Guided Diffusion Model for Protein Sequence Generation"☆71Updated last year
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆97Updated 2 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆120Updated 8 months ago
- An awesome & curated list of docking papers☆117Updated 7 months ago
- PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"☆53Updated last year