Hanziwww / AlphaFold3-GUILinks
AFusion: AlphaFold 3 GUI & Toolkit with Visualization
☆165Updated 3 months ago
Alternatives and similar repositories for AlphaFold3-GUI
Users that are interested in AlphaFold3-GUI are comparing it to the libraries listed below
Sorting:
- [Briefings In Bioinformatics] DrugAssist: A Large Language Model for Molecule Optimization☆137Updated 8 months ago
- Trainable PyTorch framework for developing protein, RNA and complex models.☆261Updated last year
- This repository is the official code source of PPFlow: Target-Aware Peptide Design with Torsional Flow Matching (ICML2024)☆86Updated 7 months ago
- Official code repository of < CBGBench: Fill in the Blank of Protein-Molecule Complex Binding Graph >☆314Updated 3 months ago
- SSAlign☆45Updated 3 months ago
- GENERator: A Long-Context Generative Genomic Foundation Model☆441Updated last month
- This is the official code of the paper "A Multi-Agent System Enables Versatile Information Extraction from the Chemical Literature"☆73Updated 2 weeks ago
- Code for EMNLP2023 paper "MolCA: Molecular Graph-Language Modeling with Cross-Modal Projector and Uni-Modal Adapter".☆83Updated last year
- Source code for ICLR2025 paper "NExT-Mol: 3D Diffusion Meets 1D Language Modeling for 3D Molecule Generation".☆89Updated 3 months ago
- Variational Autoencoder (VAE)-based molecular SMILES string generator☆14Updated 7 months ago
- A PyTorch-based system for highly accurate drug-target interaction predictions utilizing multi-modal large language models to discern str…☆35Updated last year
- A Local Frame-based Atomistic Potential☆115Updated last week
- Activity-Cliff Awareness Enables Robust Graph Learning for Molecular Property Prediction☆45Updated 3 weeks ago
- ProtMamba: a homology-aware but alignment-free protein state space model☆81Updated 6 months ago
- ☆167Updated last year
- ⚗️ An all-in-one solution for chemical property retrieval from PubChem.☆29Updated 2 months ago
- Protein language model customized for antibodies☆146Updated 9 months ago
- Predicting multiple cancer phenotypes based on somatic genomic alterations via the genomic impact transformer☆63Updated 5 years ago
- This is the official code of the paper "MolNexTR: a generalized deep learning model for molecular image recognition"☆151Updated last month
- OpenMM, an open-source platform for molecular dynamics (MD) simulations, is supported by an MCP server that offers a structured communica…☆32Updated 6 months ago
- A fully open source biomolecular structure prediction model based on AlphaFold3☆475Updated this week
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆158Updated 4 months ago
- The official implementation of GenomeOcean.☆139Updated 2 months ago
- GENERanno: A Genomic Foundation Model for Metagenomic Annotation☆304Updated last month
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆224Updated 4 months ago
- Text-guided protein design☆90Updated last month
- reasoning model trained using GRPO towards rosetta REF2015 for protein stability☆99Updated 2 months ago
- IntelliFold: A Controllable Foundation Model for General and Specialized Biomolecular Structure Prediction.☆156Updated 5 months ago
- Discovering Interpretable Features in Protein Language Models via Sparse Autoencoders☆269Updated last month
- An open-source project dedicated to build foundational large language model for natural science, mainly in physics, chemistry and materia…☆246Updated 9 months ago