Alternatives and similar repositories for BCBToolKit

Users that are interested in BCBToolKit are comparing it to the libraries listed below

• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated this week
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆37Updated 6 months ago
• SIMEXP / load_confounds
  Load fMRIprep confounds in python
  ☆37Updated 3 years ago
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆103Updated this week
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆74Updated 3 months ago
• McIntosh-Lab / tvb-ukbb
  TVB-UKBB Pipeline: TheVirtualBrain implementation of the UK Biobank pipeline
  ☆25Updated last month
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆66Updated 10 months ago
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆102Updated this week
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆70Updated last year
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆43Updated this week
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆89Updated last month
• khanlab / hippunfold
  BIDS App for Hippunfold (automated hippocampal unfolding and subfield segmentation)
  ☆59Updated this week
• NeuroanatomyAndConnectivity / surfdist
  For calculating exact geodesic distances on cortical surface meshes
  ☆53Updated last year
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆163Updated last month
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• bids-apps / MRtrix3_connectome
  Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…
  ☆52Updated 3 months ago
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆57Updated last year
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆65Updated 3 weeks ago
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆42Updated 3 years ago
• gllmflndn / gifti
  MATLAB/Octave GIfTI Library
  ☆27Updated 6 months ago
• compneuro-ncu / fmridenoise
  Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.
  ☆48Updated 2 years ago
• MICA-MNI / micapipe
  micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…
  ☆111Updated last month
• pGarciaS / PREEMACS
  PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface
  ☆17Updated last year
• neurabenn / precon_all
  precon_all surface pipline
  ☆29Updated 4 months ago
• jmtyszka / bidskit
  Utility functions for working with DICOM and BIDS neuroimaging data
  ☆63Updated last month
• ChristianGaser / cat12
  Computational Anatomy Toolbox for SPM12 or SPM25
  ☆36Updated last week
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆45Updated last week
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆104Updated this week
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆102Updated 2 weeks ago
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆37Updated 2 weeks ago