A Python library to load and analyze the MIMIC III Critical Care Database
☆30Dec 8, 2022Updated 3 years ago
Alternatives and similar repositories for MIMIC3py
Users that are interested in MIMIC3py are comparing it to the libraries listed below
Sorting:
- This is the code for retrieval of patient files and analysis of the MIMIC III Critical Care Database☆11Oct 31, 2016Updated 9 years ago
- Prediction of ICU Readmissions Using Data at Patient Discharge using MIMICIII Database☆28May 7, 2021Updated 4 years ago
- ☆131Sep 27, 2024Updated last year
- Evaluating the reproducibility of mortality prediction studies in the MIMIC-III database☆39Apr 11, 2018Updated 7 years ago
- MIMIC preprocessing for the ICML paper "Dynamic Measurement Scheduling for Event Forecasting Using Deep RL"☆19May 16, 2019Updated 6 years ago
- Download and load MIMIC-III into a PostgreSQL DB on an Ubuntu VM☆10Jul 3, 2016Updated 9 years ago
- Predict respiratory patient mortality in ICU units using the MIMIC III database☆12Dec 4, 2017Updated 8 years ago
- MIMIC III v1.4 analysis. Mortality prediction through Deep Learning.☆25Dec 9, 2019Updated 6 years ago
- Transthoracic echocardiography and mortality in sepsis: analysis of the MIMIC-III database☆53Jun 1, 2021Updated 4 years ago
- Real time mortality prediction in the MIMIC-III database☆54Apr 16, 2018Updated 7 years ago
- Predicting 30-day ICU readmissions from the MIMIC-III database☆89Mar 1, 2018Updated 8 years ago
- Evaluation of the Sepsis-3 guidelines in MIMIC-III☆199Jun 21, 2022Updated 3 years ago
- Python ICD9 library☆13May 6, 2015Updated 10 years ago
- Python suite to construct benchmark machine learning datasets from the MIMIC-III 💊 clinical database.☆872Apr 16, 2023Updated 2 years ago
- MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III☆472Jul 18, 2024Updated last year
- ☆18Aug 2, 2023Updated 2 years ago
- Readmission Prediction via Deep Contextual Embedding of Clinical Concepts☆18Dec 23, 2017Updated 8 years ago
- This is a complete preprocessing, model training, and figure generation repo for "An attention based deep learning model of clinical even…☆77Apr 25, 2024Updated last year
- Demonstrates creating a healthcare data warehouse using the MIMIC-III dataset on Redshift, Spark on EMR and Lambda☆21Jan 30, 2020Updated 6 years ago
- Quantifying biases in BERT embeddings pretrained on MIMIC-III clinical notes☆25Mar 26, 2021Updated 4 years ago
- Mapping the MIMIC-III database to the OMOP schema☆144Mar 17, 2024Updated last year
- Repository for the paper describing MIMIC-III☆84May 24, 2016Updated 9 years ago
- MIMIC-III Time Series Models☆32Sep 21, 2019Updated 6 years ago
- ☆55Apr 9, 2020Updated 5 years ago
- Multivariate recurrent GANs aimed at generating biomedical time-series. Methodology involves drawing symmetries to adversarial image gene…☆24Feb 20, 2026Updated last week
- ISeeU: Visually interpretable deep learning for mortality prediction inside the ICU☆28Dec 28, 2020Updated 5 years ago
- Learning from Discharge Summaries to extract mentioned diagnoses using Hierarchical Attention Model☆34Dec 17, 2017Updated 8 years ago
- Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction☆32Jul 26, 2019Updated 6 years ago
- A python package for removing duplicate text in clinical notes or other documents☆39Aug 6, 2020Updated 5 years ago
- ☆11Jul 27, 2021Updated 4 years ago
- Extract annotated misspellings from MIMIC-III.☆13Dec 17, 2020Updated 5 years ago
- Back end for producing indicators and loading them into the COVIDcast API.☆12Updated this week
- HUMOS is a web application aimed to help teaching Orbitrap mass spectrometry. HUMOS models a mass spectrum of a peptide mixture allowing …☆11Mar 10, 2025Updated 11 months ago
- A repository on resources about Mendelian Randomization☆10Jul 9, 2018Updated 7 years ago
- Pivoting and charting big tabular data sets in a browser UI based on R and Shiny.☆15Jan 2, 2014Updated 12 years ago
- screening metagenomes for arbitrary lineages, using gene-centric assembly methods and phylogenetics☆11Oct 29, 2020Updated 5 years ago
- modification of bibliotools 2.2 from Sébastian Grauwin☆12May 21, 2019Updated 6 years ago
- Copy number estimation of highly duplicated sequences☆10Aug 15, 2017Updated 8 years ago
- Code for Dligach and Miller 2018 paper Learning Patient Representations from Text☆10Apr 2, 2023Updated 2 years ago