Alternatives and similar repositories for shared-task

Users that are interested in shared-task are comparing it to the libraries listed below

• zenanz / ChemPatentEmbeddings
  ☆22Updated 5 years ago
• acadTags / Rare-disease-identification
  Rare disease identification from free-text clinical notes with ontologies and weak supervision
  ☆32Updated 2 years ago
• stonkgs / stonkgs
  Multimodal Transformers for biomedical text and Knowledge Graph data
  ☆35Updated 2 years ago
• andrewtavis / kwx
  BERT, LDA, and TFIDF based keyword extraction in Python
  ☆75Updated last year
• GanjinZero / KeBioLM
  Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]
  ☆65Updated 2 years ago
• MaartenGr / BERTopic_evaluation
  Code and experiments for *BERTopic: Neural topic modeling with a class-based TF-IDF procedure*
  ☆82Updated last year
• sntcristian / and-kge
  Author Disambiguation using Knowledge Graph Embeddings with Literals
  ☆20Updated 3 years ago
• xuanwang91 / AutoBioNER
  Distantly Supervised Biomedical Named Entity Recognition with Dictionary Expansion: https://ieeexplore.ieee.org/document/8983212
  ☆13Updated 5 years ago
• jiehsheng / PatentTransformer
  Transformer models for Augmented Inventing
  ☆55Updated 3 years ago
• usmaann / BioALBERT
  Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT
  ☆29Updated 4 years ago
• lasigeBioTM / BiOnt
  BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction
  ☆27Updated last year
• suamin / MIL-RBERT
  MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)
  ☆20Updated 2 years ago
• rossanez / KGen
  Knowledge graphs generation from unstructured text.
  ☆71Updated 9 months ago
• victor7246 / jointtsmodel
  Library of Joint Topic-Sentiment Models
  ☆33Updated 4 years ago
• suzgunmirac / hupd
  The Harvard USPTO Patent Dataset
  ☆77Updated last year
• dmis-lab / BioLAMA
  EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?
  ☆57Updated 2 years ago
• uf-hobi-informatics-lab / ClinicalTransformerRelationExtraction
  A project for developing transformer-based models for clinical relation extraction
  ☆130Updated 2 years ago
• expertailab / Is-BERT-self-attention-a-feature-selection-method
  ☆20Updated 4 years ago
• JohnGiorgi / seq2rel
  The corresponding code for our paper: A sequence-to-sequence approach for document-level relation extraction.
  ☆63Updated last year
• MoleculeTransformers / smiles-featurizers
  Extract Molecular SMILES embeddings from language models pre-trained with various objectives architectures.
  ☆18Updated last year
• chanzuckerberg / ChemDisGene
  Bio relation extraction labeled dataset
  ☆45Updated 3 years ago
• danilo-dessi / skg
  ☆27Updated 3 years ago
• kbogas / medknow
  Medical Relations and Entities Extraction
  ☆37Updated 3 years ago
• insilicomedicine / Fair-Evaluation-BERT
  ☆20Updated 4 years ago
• luozhhub / pyMeSHSim
  a module to calculate the MeSH similarity
  ☆27Updated 3 years ago
• rahuln / lm-bio-kgc
  Using pretrained language models for biomedical knowledge graph completion.
  ☆47Updated 4 years ago
• arthurbrack / sequential-sentence-classification
  ☆13Updated 3 years ago
• dmis-lab / BERN2
  BERN2: an advanced neural biomedical namedentity recognition and normalization tool
  ☆196Updated last year
• Ishani-Mondal / SciKG
  ☆24Updated 4 years ago
• allenai / sequential_sentence_classification
  https://arxiv.org/pdf/1909.04054
  ☆79Updated 3 years ago