PierreLambert3 / SQuaD-MDS-and-FItSNE-hybridLinks
☆15Updated 2 years ago
Alternatives and similar repositories for SQuaD-MDS-and-FItSNE-hybrid
Users that are interested in SQuaD-MDS-and-FItSNE-hybrid are comparing it to the libraries listed below
Sorting:
- generalized principal component analysis (GLM-PCA) implemented in python☆60Updated 4 years ago
- This Python package will allow you to replicate the experiments from our research on applying Optimal Transport as a similarity metric in…☆42Updated 2 years ago
- ☆10Updated last year
- ☆20Updated 4 years ago
- Creating multi-resolution embeddings and clusters from high dimensional data☆56Updated last year
- HiDeF (Hierarchical community Decoding Framework)☆15Updated last year
- Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.☆71Updated 2 months ago
- Multilayer modelling of the human transcriptome and biological mechanisms of complex diseases and traits☆11Updated 4 years ago
- Attraction-Repulsion Spectrum in Neighbor Embeddings☆31Updated 3 years ago
- An interface for Nested Stochastic Block Model for single cell analysis☆36Updated 2 months ago
- Gaussian process regression package for counts data with negative binomial and zero-inflated negative binomial likelihoods☆23Updated 9 months ago
- A Library for Denoising Single-Cell Data with Random Matrix Theory☆37Updated 2 years ago
- Conditional Autoencoders for Multiplexed Pixel Analysis☆18Updated 3 years ago
- Python code for genetic marker selection using linear programming☆42Updated last year
- ☆33Updated 4 years ago
- ☆28Updated 2 years ago
- Parallel opt-SNE implementation with Python wrapper☆38Updated 3 years ago
- Archetypal Analysis network (AAnet)☆38Updated 10 months ago
- Framework for integrating heterogeneous modalities of data☆17Updated 3 years ago
- Alignment of spatial genomics data using deep Gaussian processes☆32Updated 3 years ago
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- ☆16Updated 4 years ago
- ☆17Updated last year
- Contrastive neighbor embeddings☆57Updated last month
- Systematically learn and evaluate manifolds from high-dimensional data☆104Updated last month
- Create PyTorch Datasets from AnnData☆21Updated 9 months ago
- Latent spaces for single cells☆21Updated 2 years ago
- ☆33Updated 7 months ago
- Single-cell multi-omics integration using Optimal Transport☆48Updated 4 months ago
- Deep exponential families for single-cell data.☆20Updated 2 months ago