PierreLambert3 / SQuaD-MDS-and-FItSNE-hybridLinks
☆15Updated 2 years ago
Alternatives and similar repositories for SQuaD-MDS-and-FItSNE-hybrid
Users that are interested in SQuaD-MDS-and-FItSNE-hybrid are comparing it to the libraries listed below
Sorting:
- ☆10Updated last year
- Contrastive neighbor embeddings☆54Updated 3 months ago
- ☆33Updated last month
- ☆20Updated 4 years ago
- Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.☆70Updated 11 months ago
- An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data☆7Updated 7 years ago
- HiDeF (Hierarchical community Decoding Framework)☆14Updated last year
- This Python package will allow you to replicate the experiments from our research on applying Optimal Transport as a similarity metric in…☆38Updated 2 years ago
- Analaysis for the batch correction paper☆10Updated 2 months ago
- Attraction-Repulsion Spectrum in Neighbor Embeddings☆31Updated 2 years ago
- A Jupyter widget for comparing two embeddings with shared labels by their confusion, neighborhoods, and size.☆44Updated 7 months ago
- Variant impact phenotyping using Perturb-seq☆9Updated last year
- An interface for Nested Stochastic Block Model for single cell analysis☆35Updated 3 months ago
- ☆27Updated last year
- Deep learning models to predict enhancers in different Drosophila embryo tissues☆17Updated last year
- Conditional Autoencoders for Multiplexed Pixel Analysis☆15Updated 2 years ago
- generalized principal component analysis (GLM-PCA) implemented in python☆60Updated 4 years ago
- A spectral method for assessing and combining multiple data visualizations☆50Updated last year
- Creating multi-resolution embeddings and clusters from high dimensional data☆53Updated 9 months ago
- Parallel opt-SNE implementation with Python wrapper☆37Updated 3 years ago
- Marker Selection by matching manifolds and elastic net☆23Updated 8 months ago
- Differential Robust PCA☆13Updated 2 years ago
- Alignment of spatial genomics data using deep Gaussian processes☆26Updated 2 years ago
- ☆61Updated 5 months ago
- MultiMAP for integration of single cell multi-omics☆56Updated last year
- Gaussian process regression package for counts data with negative binomial and zero-inflated negative binomial likelihoods☆21Updated 4 months ago
- TensorFlow-Implementation of Deep Archetypal Analysis☆13Updated 3 years ago
- Maximum mean discrepancy comparisons for single cell profiling experiments☆16Updated 3 years ago
- Python code for genetic marker selection using linear programming☆42Updated last year
- Hierarchical Graph Clustering using Node Pair Sampling (MLG, KDD Workshop) - Multi-scale Clustering in Graphs using Modularity (DiVA)☆14Updated 4 years ago