recoh / pipeline
☆20Updated 3 years ago
Alternatives and similar repositories for pipeline:
Users that are interested in pipeline are comparing it to the libraries listed below
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆16Updated this week
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆35Updated 3 years ago
- a tool to segment the hypothalamus and associated subunits on T1-weighted MRI scans☆26Updated 2 years ago
- A deep learning framework for automated analysis of body composition from abdominal CT☆18Updated 11 months ago
- LGI: Cortical Shape-Adaptive Local Gyrification Index☆11Updated 4 years ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆11Updated 10 months ago
- Library for generating images by sampling a GMM conditioned on label maps☆25Updated last year
- UKBB MRI semantic segmentation for Abdominal Dixon and other modalities☆14Updated last year
- A project to provide custom sorting and renaming of dicom files☆78Updated 10 months ago
- ☆19Updated 3 years ago
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆34Updated last month
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆39Updated 2 months ago
- MIRTK based SVR reconstruction☆50Updated last month
- This repository contains code used to prepare the LUMIERE Glioblastoma dataset.☆21Updated last year
- This is a tool to quickly preview nifti images on the terminal☆60Updated 3 months ago
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆27Updated last week
- TSAN: Two-Stage-Age-Net, for brain age estimation from T1-weighted MRI data.☆66Updated last year
- Automatic sorting of brain MRI scans by scan type☆24Updated 3 months ago
- Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940☆16Updated 7 years ago
- Multi-site dMRI harmonization☆47Updated this week
- Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)☆28Updated 2 years ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆98Updated this week
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆32Updated last month
- Brain Segmentation with MONAI and Dynamic Unet (nn-unet)☆25Updated 3 months ago
- ☆17Updated 10 months ago
- perivascular space segmentation☆14Updated 2 years ago
- Standardized Environment for Radiomics Analysis☆25Updated 5 years ago
- Harmonization of multi-site imaging data with ComBat (Python)☆133Updated 2 years ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆72Updated 9 months ago
- ☆28Updated 3 years ago