recoh / pipelineLinks
☆20Updated 4 years ago
Alternatives and similar repositories for pipeline
Users that are interested in pipeline are comparing it to the libraries listed below
Sorting:
- This is a tool to quickly preview nifti images on the terminal☆63Updated 5 months ago
- Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)☆29Updated 3 years ago
- A project to provide custom sorting and renaming of dicom files☆78Updated 2 months ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆103Updated last month
- Pre-trained models and utilities for deep learning on medical images in Python☆228Updated this week
- Some code for processing and analysing UK Biobank cardiac MR images.☆173Updated 2 weeks ago
- Automatic sorting of brain MRI scans by scan type☆25Updated 6 months ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆37Updated 4 years ago
- Very fast greedy diffeomorphic registration code☆80Updated 2 months ago
- Workflow for Optimal Radiomics Classification☆76Updated last month
- UKBB MRI semantic segmentation for Abdominal Dixon and other modalities☆14Updated last year
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆39Updated 4 months ago
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆40Updated 2 weeks ago
- Harmonization of multi-site imaging data with ComBat (Python)☆143Updated 2 years ago
- LGI: Cortical Shape-Adaptive Local Gyrification Index☆12Updated 4 years ago
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆36Updated 3 months ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆73Updated 11 months ago
- The easiest tool for experimenting with radiomics features.☆41Updated last year
- Pretrained neural networks for UK Biobank brain MRI images. SFCN, 3D-ResNet etc.☆153Updated 9 months ago
- Automatic White Matter Bundle Segmentation☆243Updated last year
- a tool to segment the hypothalamus and associated subunits on T1-weighted MRI scans☆26Updated 2 years ago
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆73Updated 3 years ago
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆35Updated 3 months ago
- Library for generating images by sampling a GMM conditioned on label maps☆26Updated last year
- This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utili…☆158Updated last month
- Brain Segmentation with MONAI and Dynamic Unet (nn-unet)☆29Updated 5 months ago
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆16Updated 2 months ago
- NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.☆150Updated 3 years ago
- Multi-subject data for the Spine Generic project☆28Updated 3 weeks ago
- A framework for joint super-resolution and image synthesis, without requiring real training data☆171Updated last year