recoh / pipeline
☆20Updated 3 years ago
Alternatives and similar repositories for pipeline:
Users that are interested in pipeline are comparing it to the libraries listed below
- a tool to segment the hypothalamus and associated subunits on T1-weighted MRI scans☆25Updated 2 years ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆34Updated 3 years ago
- UKBB MRI semantic segmentation for Abdominal Dixon and other modalities☆14Updated last year
- Brain Segmentation with MONAI and Dynamic Unet (nn-unet)☆17Updated 2 months ago
- Library for generating images by sampling a GMM conditioned on label maps☆23Updated 11 months ago
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆34Updated this week
- Automatic sorting of brain MRI scans by scan type☆24Updated 2 months ago
- A deep learning framework for automated analysis of body composition from abdominal CT☆19Updated 10 months ago
- A project to provide custom sorting and renaming of dicom files☆77Updated 8 months ago
- LGI: Cortical Shape-Adaptive Local Gyrification Index☆11Updated 4 years ago
- Very fast greedy diffeomorphic registration code☆71Updated last week
- A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration☆40Updated 8 months ago
- Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)☆27Updated 2 years ago
- Some code for processing and analysing UK Biobank cardiac MR images.☆163Updated 4 months ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆70Updated 8 months ago
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆31Updated this week
- Standardized Environment for Radiomics Analysis☆25Updated 5 years ago
- Workflow for Optimal Radiomics Classification☆74Updated 3 weeks ago
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆37Updated last month
- This repository contains code used to prepare the LUMIERE Glioblastoma dataset.☆20Updated last year
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆37Updated last month
- Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix☆50Updated 2 weeks ago
- MIRTK based SVR reconstruction☆50Updated 4 months ago
- ☆19Updated 3 years ago
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆15Updated 8 months ago
- Multi-subject data for the Spine Generic project☆23Updated last week
- Example docker containers for the WMH Segmentation Challenge☆21Updated 4 years ago
- An abundance of augmentation layers☆14Updated 2 months ago
- Visualization for radiomics feature generated by pyradiomics☆47Updated 2 months ago
- This is a tool to quickly preview nifti images on the terminal☆59Updated last month