Collection of bioinformatics training materials
☆17Aug 18, 2022Updated 4 years ago
Alternatives and similar repositories for training-collection
Users that are interested in training-collection are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Courses, tutorials and books that facilitate bioinformatics.☆70Jan 2, 2024Updated 2 years ago
- RNAseq pipeline based on snakemake☆27Mar 8, 2023Updated 3 years ago
- INNUENDO quality control of reads, de novo assembly and contigs quality assessment, and possible contamination search☆15Dec 14, 2022Updated 3 years ago
- Drug-target interaction prediction using deepWalk node embedding algorithm on drugBank☆11Nov 8, 2020Updated 5 years ago
- This repository contains two apps. One app is for the user and the second is for the admin!☆15Jun 22, 2020Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆11Feb 16, 2021Updated 5 years ago
- HuBMAP Data Portal front end☆13Updated this week
- Gene Ontology (GO) enrichment analysis☆12Aug 7, 2023Updated 3 years ago
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆40Aug 14, 2023Updated 3 years ago
- The genTB project, the Django site, variant calling and prediciton pipeline, and mapping pipeline with hooks to two ravens☆10Apr 6, 2026Updated 5 months ago
- NGSTools☆16Mar 3, 2017Updated 9 years ago
- example ruffus pipeline☆18Sep 30, 2011Updated 14 years ago
- ☆16Feb 17, 2025Updated last year
- Flutter Ecommerce, using Strapi for backend and Stripe for transactions☆25May 12, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Data repository for pkasolver☆13Mar 28, 2022Updated 4 years ago
- GitHub Action to automatically generate md documentation from bash script with shdoc☆10Jan 2, 2021Updated 5 years ago
- A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…☆21Aug 17, 2026Updated last month
- Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to constr…☆34Nov 28, 2023Updated 2 years ago
- ☆26Jan 14, 2021Updated 5 years ago
- Model to predict kinase-ligand pKi values.☆12Jul 6, 2023Updated 3 years ago
- Perform probe-guided blind docking with FTMap and DOCK6☆10Apr 25, 2023Updated 3 years ago
- Notes on ChIP-seq and other-seq-related tools☆26Jul 16, 2026Updated 2 months ago
- Pipelines for NGS data preprocessing by the Bock lab and friends☆22Aug 29, 2022Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆18Dec 15, 2021Updated 4 years ago
- Collection of cloud-based biomedical data science learning modules funded by the National Institute of General Medical Sciences at the NI…☆94Jun 6, 2025Updated last year
- Supporting Information of Publications☆14Mar 24, 2019Updated 7 years ago
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Sep 28, 2021Updated 4 years ago
- This is a thesis project about comparing imputation performances between deep learning methods and conventional statistical methods. In t…☆19Oct 22, 2024Updated last year
- ☆12Nov 28, 2023Updated 2 years ago
- workshop website on readthedocs☆24Jun 1, 2026Updated 3 months ago
- 4 Network Embedding algorithms (Deepwalk, Node2Vec, LINE, AANE) tested on 2 datasets (CORA and Tencent Weibo)☆23Oct 4, 2022Updated 3 years ago
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆29Aug 20, 2026Updated last month
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- maxsmi: a guide to SMILES augmentation. Find the optimal SMILES augmentation for accurate molecular prediction.☆35Feb 22, 2024Updated 2 years ago
- Extract ligands from original PDB file☆10Nov 1, 2019Updated 6 years ago
- In process work on active learning tutorials☆10Feb 19, 2024Updated 2 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆26Nov 17, 2022Updated 3 years ago
- Python project that allow scripts to easily and safely update themselves if they are in a git repo☆11Sep 10, 2020Updated 6 years ago
- Predicting or pretending: artificial intelligence for protein-ligand interactions lack of sufficiently large and unbiased datasets☆12Feb 21, 2021Updated 5 years ago
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Sep 29, 2017Updated 8 years ago