High Throughput Electron Microscopy Image Processing Software
☆41Apr 21, 2026Updated last week
Alternatives and similar repositories for focus
Users that are interested in focus are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python programs for electron microscopy☆137Jan 15, 2026Updated 3 months ago
- CryoSPARC is the state-of-the-art platform used globally for obtaining 3D structural information from single particle cryo-EM data. The …☆13Apr 2, 2026Updated 3 weeks ago
- Python library that enables scripting access to CryoSPARC, a cryo-EM software package.☆47Apr 22, 2026Updated last week
- Public release of Ptolemy package for automated targeting of Cryo-EM grids☆18Mar 9, 2025Updated last year
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆59Oct 3, 2025Updated 6 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆59May 14, 2024Updated last year
- Localized reconstruction of flexible subunits from cryo-EM images☆16Oct 19, 2020Updated 5 years ago
- Documentations for RELION☆14Mar 13, 2026Updated last month
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆25Mar 5, 2026Updated last month
- ☆19Dec 22, 2025Updated 4 months ago
- A collaborative knowledge sharing platform for the cryo-ET community☆20Aug 7, 2024Updated last year
- A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.☆159Jan 25, 2021Updated 5 years ago
- These are programs that deal with anisotropy (both resolution and sampling)☆22Mar 16, 2018Updated 8 years ago
- ☆17Sep 20, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Model-based bright and dark-field electron tomography☆17Apr 3, 2020Updated 6 years ago
- Image-processing software for cryo-electron microscopy☆531Apr 1, 2026Updated last month
- GPU accelerating computing for Bayesian inference of electron microscopy images. BioEM is a publicly available software that enables the …☆11Apr 7, 2023Updated 3 years ago
- Fiji/ImageJ macros to quickly add a scale bar to an (electron microscopy) image.☆13Apr 23, 2025Updated last year
- 3D-CTF correction for cryo-electron tomography☆29Nov 8, 2018Updated 7 years ago
- A Python implementation of the MRC2014 file format☆87Mar 2, 2026Updated last month
- SPIDER (System for Processing Image Data from Electron microscopy and Related fields) is an image processing system for electron microsc…☆20Apr 19, 2026Updated last week
- Ice gradient estimation for cryoEM☆11Oct 11, 2024Updated last year
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆20Jan 23, 2026Updated 3 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A somewhat cleaned-up version of the TOM toolbox for electron tomography☆16Nov 26, 2016Updated 9 years ago
- motion correction for movies recorded using direct electron detectors☆14Apr 30, 2017Updated 9 years ago
- A Docker-based distribution of Appion-Protomo.☆11Oct 23, 2020Updated 5 years ago
- Modules for generating nanoscale+ atomic scenes, primarily using pymatgen as generators with S/TEM image simulation in mind☆16Mar 5, 2025Updated last year
- ☆16Feb 4, 2017Updated 9 years ago
- BoxNet implemented in TensorFlow and all current training data☆33Apr 25, 2019Updated 7 years ago
- PyTom software for cryo-tomogram processing☆45Jan 5, 2026Updated 3 months ago
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆31Jul 17, 2025Updated 9 months ago
- Badly written scripts for making cryoEM easier☆13Dec 15, 2020Updated 5 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- New program to follow Relion projects in a browser!☆48Jan 5, 2026Updated 3 months ago
- Python customizations for the macromolecular model building software Coot.☆23Mar 25, 2026Updated last month
- pyCHIP is a tool for segmentation and feature classification in transmission electron microscopy (TEM) images based on a small support se…☆20Jan 24, 2022Updated 4 years ago
- Half-synthetic cryoEM micrograph generator that projects pdbs>mrcs onto existing buffer cryoEM micrographs☆18Oct 25, 2024Updated last year
- Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset☆32Sep 18, 2025Updated 7 months ago
- ☆55Aug 19, 2024Updated last year
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆41Jan 30, 2024Updated 2 years ago