spider-em / SPIDERLinks
SPIDER (System for Processing Image Data from Electron microscopy and Related fields) is an image processing system for electron microscopy, especially usefull for single-particle reconstruction.
☆19Updated last week
Alternatives and similar repositories for SPIDER
Users that are interested in SPIDER are comparing it to the libraries listed below
Sorting:
- ☆40Updated 2 months ago
- High Throughput Electron Microscopy Image Processing Software☆38Updated 2 months ago
- CryoSPARC is the state-of-the-art platform used globally for obtaining 3D structural information from single particle cryo-EM data. The …☆13Updated last month
- A new repository (with deleted history) in preparation for release 3.0 of SIMPLE☆24Updated this week
- Python library that enables scripting access to CryoSPARC, a cryo-EM software package.☆38Updated this week
- A Modular Platform for Streamlining Automated Cryo-FIB Workflows☆25Updated 5 months ago
- Control and Automation of Transmission Electron Microscopes☆13Updated 3 years ago
- A program interfacing Segment Anything with cryoSPARC via cryosparc-tools to efficiently identify vesicle-embedded membrane proteins and …☆12Updated 5 months ago
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆51Updated 2 months ago
- Public release of Ptolemy package for automated targeting of Cryo-EM grids☆18Updated 5 months ago
- ☆18Updated last year
- SmartScope is a framework for systematic evaluation of cryo-EM specimens☆17Updated 3 months ago
- PIP package of cryoCARE☆35Updated last year
- ☆19Updated 5 months ago
- motion correction for movies recorded using direct electron detectors☆14Updated 8 years ago
- ☆48Updated 11 months ago
- A laboratory information management system (LIMS) for cryoEM☆23Updated 2 years ago
- A possible schema for cryoET geometry metadata☆10Updated this week
- Python module to read/write SerialEM navigator files.☆11Updated 2 years ago
- Makes RELION 3.1 Optics Groups from EPU AFIS data☆18Updated 2 years ago
- ☆20Updated 2 months ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆36Updated this week
- A universal API for FIBSEM control☆29Updated last month
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆23Updated 2 months ago
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆28Updated last month
- 3D-CTF correction for cryo-electron tomography☆26Updated 6 years ago
- Parallel cryo electron tomography via beam image shift☆36Updated last month
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆37Updated last year
- ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.☆34Updated 5 months ago
- Conventions for 3DEM software packages☆19Updated 3 years ago