Python-based Illumina methylation array analysis software
☆16Jan 25, 2024Updated 2 years ago
Alternatives and similar repositories for methylize
Users that are interested in methylize are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python-based preprocessing software for Illumina methylation arrays☆43Aug 17, 2023Updated 3 years ago
- Python package for processing and analyzing Illumina DNA methylation data☆12Jul 8, 2026Updated 3 months ago
- Preprocessing methylation pipeline, written in python. Easy to use and highly parallelized.☆36Feb 11, 2020Updated 6 years ago
- Personal experiments and implementation examples of deep learning papers.☆12Jan 23, 2018Updated 8 years ago
- A tool that evolves small brains capable of scanning and classifying an image.☆14Jul 25, 2016Updated 10 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Datasets and notebooks☆13Oct 26, 2016Updated 10 years ago
- Documentation of matestack-ui-core built with matestack itself, consuming Github API for content☆11Mar 11, 2021Updated 5 years ago
- Tools for making plots of genomic datasets in a genome-browser-like format☆31Dec 6, 2024Updated last year
- Scikit-learn quickstart tutorial for Webstep☆10Oct 21, 2019Updated 7 years ago
- Musculoskeletal Analysis extension for 3D Slicer. Currently has cortical, cancellous, and bone density analysis.☆13May 2, 2024Updated 2 years ago
- Multiple trajectory alignment of time-series data☆13Oct 14, 2023Updated 3 years ago
- The Singularity Community Catalog of Singularity* recipe files.☆11Oct 27, 2025Updated last year
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆16Apr 13, 2026Updated 6 months ago
- Command-line interface for performing software engineering tasks using large language models. It is based on Cline, but is simpler, uses …☆12Aug 27, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- This repository contains the source code of JUDI, a workflow management system for developing complex bioinformatics software with many p…☆33Dec 23, 2021Updated 4 years ago
- ☆10Oct 13, 2026Updated 3 weeks ago
- NGS perl modules☆10Oct 29, 2026Updated last week
- High End Visualization (HEV) is a software environment for developing visualization applications in both desktop and immersive environmen…☆11Sep 18, 2019Updated 7 years ago
- Data-driven design of context-specific regulatory elements☆10Jun 18, 2024Updated 2 years ago
- Feature selector is a tool for dimensionality reduction of machine learning datasets.☆19Jun 17, 2024Updated 2 years ago
- Modular framework for deep learning predictions on methylation data.☆61Jun 2, 2020Updated 6 years ago
- Pytorch implementation of DeePromoter Active sequence detection for promoter(DNA subsequence regulates transcription initiation of the ge…☆13Jul 8, 2021Updated 5 years ago
- Collection of Sphinx extensions similar to (but more flexible than) numpydoc☆12Updated this week
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆18Dec 7, 2023Updated 2 years ago
- Jupyter notebook repository for reproducing analysis in "DNA Methylation Landscape of the Mouse Brain at Single-Cell Resolution"☆14Apr 1, 2020Updated 6 years ago
- This is the repository for the project entitled "Revisiting K-mer Profile for Effective and Scalable Genome Representation Learning"☆11Oct 21, 2024Updated 2 years ago
- Fast, modular and reproducible generation of publication quality scientific figures and movies with only a few lines of code.☆17Apr 9, 2025Updated last year
- ☆14May 12, 2023Updated 3 years ago
- OpenSeaDragon component for Vue.js☆29Apr 27, 2018Updated 8 years ago
- Setting up a Jupyterhub Dockercontainer to spawn Jupyter Notebooks with GPU support (containing Tensorflow, Pytorch and Keras)☆25Aug 21, 2019Updated 7 years ago
- Scikit-learn quickstart tutorial for Webstep☆20May 4, 2017Updated 9 years ago
- A nextflow pipeline for processing sc-RNASeq data, performing QC and integration and preparing the results for further investigation usin…☆11Jun 30, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A small library for rendering parsed GEXF graphs in D3.js☆22May 5, 2014Updated 12 years ago
- ☆11Feb 26, 2025Updated last year
- Annotated sequence data☆11Feb 2, 2025Updated last year
- ☆11Aug 17, 2022Updated 4 years ago
- Source code of ProDMM. The paper is titled with "Unveiling Protein-DNA Interdependency: Harnessing Unified Multimodal Sequence Modeling, …☆10Oct 12, 2026Updated 3 weeks ago
- combining p-values using modified stouffer-liptak for spatially correlated results (probes)☆50Mar 18, 2022Updated 4 years ago
- Fuzzy string search algorithm in Rust☆12Jul 9, 2019Updated 7 years ago