Open or Easy Access Clinical Data Sources for Biomedical Research
☆196Jan 5, 2017Updated 9 years ago
Alternatives and similar repositories for ClinicalDataSources
Users that are interested in ClinicalDataSources are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Real time mortality prediction in the MIMIC-III database☆54Apr 16, 2018Updated 8 years ago
- Code for AMIA CRI 2016 paper "Learning Low-Dimensional Representations of Medical Concepts"☆250Aug 24, 2020Updated 6 years ago
- Source code for Medical Concept Embedding with Time-Aware Embedding☆22Aug 21, 2019Updated 7 years ago
- Code for `Extending inferences from a randomized trial to a new target population'☆10Jun 23, 2020Updated 6 years ago
- Code to study the generalisability of benchmark models on non-stationary EHRs.☆15Aug 7, 2019Updated 7 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Visualization of electronic medical records or other sequence event data.☆93Mar 8, 2019Updated 7 years ago
- An R package for evaluating phenotype algorithms.☆23Oct 22, 2026Updated last week
- A curated list of ML|NLP resources for healthcare.☆493Mar 26, 2023Updated 3 years ago
- Corresponding code for experiments described in "Predicting Clinical Outcomes Across Changing Electronic Health Records." Presented at KD…☆11Sep 8, 2017Updated 9 years ago
- MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases☆3,429Sep 1, 2026Updated 2 months ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆90Jan 13, 2023Updated 3 years ago
- Evaluating the reproducibility of mortality prediction studies in the MIMIC-III database☆39Apr 11, 2018Updated 8 years ago
- Crowd-source tool to annotate, rank and generally enhance the clarity and accuracy of clinical trial information.☆16Mar 6, 2023Updated 3 years ago
- Survival modelling via ODEs☆12Aug 4, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- [ACL 2024] FactPICO☆12Feb 26, 2024Updated 2 years ago
- Machine learning on electronic health records☆11Jan 29, 2018Updated 8 years ago
- Machine reading comprehension on clinical case reports☆154Aug 28, 2025Updated last year
- Chronic Disease Prediction Using Medical Notes☆276Sep 26, 2019Updated 7 years ago
- MedGraph: Structural and Temporal Representation Learning of Electronic Medical Records☆23Aug 11, 2020Updated 6 years ago
- R package for delineating temporal dataset shifts in Eletronic Health Records☆17Apr 28, 2026Updated 6 months ago
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 9 years ago
- Biomedical concept relatedness benchmark sampled from electronic health records☆11Jul 14, 2022Updated 4 years ago
- https://celehs.github.io/PheCAP/☆22Jun 24, 2021Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Classification of Single cells by Transfer Learning☆12Oct 11, 2025Updated last year
- Statistical models of children's growth curves that predict which kids are at risk of obesity.☆15Nov 17, 2013Updated 12 years ago
- Clinical NLP workshop for ODSC☆41Oct 31, 2019Updated 7 years ago
- R package for prostate cancer microsimulation☆21Sep 15, 2026Updated last month
- Sequential model-based optimization with a `scipy.optimize` interface☆15Aug 3, 2017Updated 9 years ago
- Python suite to construct benchmark machine learning datasets from the MIMIC-III 💊 clinical database.☆893Apr 16, 2023Updated 3 years ago
- A neural network library based on tensorflow and with true sklearn compatibility.☆11Sep 17, 2016Updated 10 years ago
- This is a complete preprocessing, model training, and figure generation repo for "An attention based deep learning model of clinical even…☆76Apr 25, 2024Updated 2 years ago
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆600Mar 25, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Weak supervision methods for extracting real world evidence from EHRs☆35Apr 7, 2020Updated 6 years ago
- Files related to an insight data science project focused on predicting death in atherosclerosis patients from the MIMICIII database.☆11Mar 20, 2018Updated 8 years ago
- A clinical research interface geared at collecting robust and consistent data by providing a strong framework for designing data dictiona…☆12Sep 25, 2025Updated last year
- Temporal-Comorbidity Adjusted Risk of Emergency Readmission☆10Dec 23, 2017Updated 8 years ago
- ML on NHANES nutrition data☆11Jan 23, 2018Updated 8 years ago
- Classes for ClinicalTrials.gov related projects☆48Aug 13, 2019Updated 7 years ago
- Source code used to develop the OHDSI knowledge base of sources with information relevant for assessing assocations between drugs and hea…☆57Aug 26, 2018Updated 8 years ago