DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation
☆34Apr 16, 2025Updated last year
Alternatives and similar repositories for DL-DiReCT
Users that are interested in DL-DiReCT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- C implementation of Brain Extraction based on nonlocal Segmentation Technique☆16Jul 5, 2026Updated last month
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆16Sep 23, 2024Updated last year
- MELD classifier using Geometric Deep Learning☆35Aug 25, 2026Updated last week
- A single NIfTI image saved with all 48 spatial rotation permutations☆31Jul 7, 2021Updated 5 years ago
- Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM…☆25Dec 11, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python script to obtain dynamic functional connectivity metrics, after using a sliding window approach, statistical analyses to test for …☆12Sep 10, 2024Updated last year
- Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)☆21Feb 3, 2021Updated 5 years ago
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆372Jul 20, 2026Updated last month
- Dipy pipeline for reconstruction and tracking of tractography from Human Connectome Project dataset☆11Nov 18, 2015Updated 10 years ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Mar 17, 2021Updated 5 years ago
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆32Aug 15, 2026Updated 2 weeks ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆82Updated this week
- Handling of structural neuroimaging file formats for Julia. FreeSurfer MGH, surf, annot, label, etc.☆13Aug 26, 2026Updated last week
- Matlab for NIFTI support☆10Dec 26, 2018Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆15Apr 2, 2026Updated 5 months ago
- Large Medical Image Foundation Model☆19Nov 8, 2023Updated 2 years ago
- Displays regional stats on Freesurfer surfaces in MATLAB☆16Sep 18, 2020Updated 5 years ago
- MR to CT for TUS acoustic simulations☆28Feb 25, 2025Updated last year
- R package to implement template ICA☆11May 20, 2025Updated last year
- ☆17Jul 30, 2026Updated last month
- Just when I thought you couldn’t possibly be any dumber, you go and do something like this… and totally redeem yourself!☆27Aug 12, 2026Updated 3 weeks ago
- nii_preprocess adapted for LARC and ABC studies at UofSC☆25Feb 16, 2022Updated 4 years ago
- Combined cortical/subcortical atlases for xcp-d and qsiprep☆33Aug 28, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Alzheimer's Disease Detection through Whole-Brain 3D-CNN MRI☆11Sep 21, 2020Updated 5 years ago
- ciftiTools R package☆59Aug 24, 2026Updated last week
- Toolbox for the analysis of cerebellar imaging data☆27Jul 3, 2024Updated 2 years ago
- Preprocessing of diffusion MRI☆188Updated this week
- BIDS App for Hippunfold (automated hippocampal unfolding and subfield segmentation)☆69Aug 7, 2026Updated 3 weeks ago
- [Frontiers in Comp. Neuro.] Deep Attention Super-Resolution of Brain Magnetic Resonance Images Acquired Under Clinical Protocols☆17Aug 25, 2022Updated 4 years ago
- A hands-free DTI, DKI, FBI and FBWM preprocessing pipeline. Information on algorithms and preprocessing steps are available at https://ww…☆31Aug 18, 2026Updated 2 weeks ago
- WM tract atlases for the human (HCP and UK Biobank) and Macaque brain and connectivity blueprint atlases for the human (HCP) and macaque …☆21Dec 23, 2021Updated 4 years ago
- ☆26Jun 12, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆58Updated this week
- These protocols are for the analysis of subcortical volume, and cortical thickness and surface area data within FreeSurfer ROI's for ENIG…☆26Mar 3, 2026Updated 6 months ago
- An open brain MRI dataset and baseline evaluations for tumor recurrence prediction☆11Apr 29, 2024Updated 2 years ago
- ☆58Oct 26, 2025Updated 10 months ago
- Ultra rapid nanopore whole genome sequencing pipeline, published in https://www.nature.com/articles/s41587-022-01221-5☆18Jun 28, 2024Updated 2 years ago
- 3D Slicer module to visualize the EPISURG dataset and segment postoperative brain resection cavities using deep learning.☆12Feb 4, 2021Updated 5 years ago
- BrainSuite's structural, diffusion, and functional MRI processing pipelines with QC functionalities.☆15Mar 16, 2026Updated 5 months ago