DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation
☆34Apr 16, 2025Updated last year
Alternatives and similar repositories for DL-DiReCT
Users that are interested in DL-DiReCT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Jul 23, 2024Updated 2 years ago
- Automatic optimization of pulseq sequences☆14Updated this week
- FSL randomise related scripts☆10Jan 10, 2022Updated 4 years ago
- Handling of structural neuroimaging file formats for Julia. FreeSurfer MGH, NIfTI, surf, annot, label, etc.☆13Sep 16, 2026Updated last month
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆16Sep 23, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python module for processing dynamic contrast enhanced magnetic resonance imaging (DCE-MRI) data☆33Apr 28, 2022Updated 4 years ago
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆33Oct 10, 2026Updated 3 weeks ago
- MELD classifier using Geometric Deep Learning☆36Oct 26, 2026Updated last week
- A single NIfTI image saved with all 48 spatial rotation permutations☆30Jul 7, 2021Updated 5 years ago
- C implementation of Brain Extraction based on nonlocal Segmentation Technique☆16Oct 6, 2026Updated 3 weeks ago
- Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM…☆25Dec 11, 2023Updated 2 years ago
- Collection of scripts to create population-specific average anatomical models☆11Mar 24, 2024Updated 2 years ago
- mrQA: tools for quality assurance in medical imaging datasets, including protocol compliance☆14May 8, 2024Updated 2 years ago
- Python script to obtain dynamic functional connectivity metrics, after using a sliding window approach, statistical analyses to test for …☆12Sep 10, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)☆21Feb 3, 2021Updated 5 years ago
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆382Sep 17, 2026Updated last month
- DL tool for white matter hyperintensities segmentation☆21Oct 15, 2026Updated 2 weeks ago
- Dipy pipeline for reconstruction and tracking of tractography from Human Connectome Project dataset☆11Nov 18, 2015Updated 10 years ago
- JuSpyce - a toolbox for assessment of spatial associations between brain maps. DEPRICATED! Succeeded by "NiSpace"☆11May 26, 2025Updated last year
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Mar 17, 2021Updated 5 years ago
- ☆59Updated this week
- A repository for my neuroimaging scripts and resources. Heavy on the FSL and AFNI.☆10Sep 18, 2015Updated 11 years ago
- Code (in Matlab and R) to perform a spherical rotation (permutation) of a parcellated cortical map.☆53Jun 29, 2023Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆60Sep 12, 2026Updated last month
- Matlab for NIFTI support☆10Dec 26, 2018Updated 7 years ago
- Run ICA-AROMA on fMRIPrep derivatives☆25Apr 1, 2026Updated 7 months ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆82Oct 6, 2026Updated 3 weeks ago
- A package for publication-ready brain surface figures☆78Nov 18, 2025Updated 11 months ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆15Apr 2, 2026Updated 7 months ago
- Browser-based version of FreeView, built on top of niivue☆24Oct 27, 2026Updated last week
- Toolbox for structural and functional brain connectivity reconstruction.☆19Oct 21, 2024Updated 2 years ago
- Plot the boundaries of ROIs on a surface☆74Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Software for generating a brain-predicted age value, using Gaussian Processes regression, implemented in R☆117Sep 14, 2026Updated last month
- Gray-matter Based Spatial Statistics☆23Apr 19, 2023Updated 3 years ago
- Network Modification Tool☆24Jul 23, 2026Updated 3 months ago
- quick segmentation of the hippocampus from T1 MRI images. (pytorch version)☆32Dec 8, 2025Updated 10 months ago
- R package to implement template ICA☆11Sep 17, 2026Updated last month
- HDR-MRI Algorithms from "Local contrast-enhanced MR images via high dynamic range processing" published in MRM☆17Nov 13, 2018Updated 7 years ago
- NMF Code for calculating components from Brain imaging data.☆19Sep 14, 2022Updated 4 years ago