Burrows-Wheeler-Scott transform
☆14Jun 7, 2013Updated 13 years ago
Alternatives and similar repositories for bwst
Users that are interested in bwst are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Sample an approximate number of reads from a fastq file without reading the entire file☆11Jun 20, 2017Updated 9 years ago
- Boiler: a software tool for highly efficient, lossy compression of RNA-seq alignments☆13Jul 14, 2016Updated 9 years ago
- This project is a implementation in PyTorch for ZO-AdaMU optimization: Adapting Perturbation with the Momentum and Uncertainty in Zeroth-…☆14Dec 12, 2023Updated 2 years ago
- public-domain implementation of entropy coder from ANS family.☆20Jun 10, 2019Updated 7 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15May 22, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Code for the Recount project☆11Dec 13, 2024Updated last year
- ☆16Jun 19, 2014Updated 12 years ago
- Algorithms that work on generic C arrays☆11Feb 13, 2017Updated 9 years ago
- Memory-efficient Count-Min Sketch Counter (based on Madoka C++ library)☆27Nov 30, 2025Updated 7 months ago
- run-length BWT tools for genomic sequences☆19May 19, 2022Updated 4 years ago
- for science☆10Feb 6, 2020Updated 6 years ago
- Attempting to decode the mysterious /r/A858DE45F56D9BC9 subreddit data☆11Jun 11, 2015Updated 11 years ago
- In terms of my master thesis, I work on a H.264 MVC implementation in libvacodec based on H.264 Annex H.☆12Apr 25, 2013Updated 13 years ago
- ☆11Dec 8, 2016Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Oct 31, 2019Updated 6 years ago
- python bindings for Image Processing On Line (IPOL) codes☆12Aug 5, 2018Updated 7 years ago
- ☆10Feb 23, 2024Updated 2 years ago
- The official implementation of ImageBind-LLM and Whisper-LLM from the paper "Dynamic-SUPERB: Towards A Dynamic, Collaborative, and Compre…☆21Oct 30, 2023Updated 2 years ago
- Robust individual and aggregate checksums for nucleotide sequences☆17Mar 3, 2026Updated 4 months ago
- Mach-O file format support for FreeBSD (image activation, etc)☆16Apr 12, 2016Updated 10 years ago
- Dynamic succinct/compressed data structures☆118Dec 17, 2025Updated 6 months ago
- Rapid estimation of phylogenetic trees using sketching☆13Feb 18, 2025Updated last year
- A hash map using the BooPHF perfect hash function☆13Sep 25, 2016Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Simodense: a RISC-V softcore for custom SIMD instructions☆17Feb 16, 2026Updated 4 months ago
- An AppleScript for gathering offscreen windows to the main display☆16Oct 6, 2014Updated 11 years ago
- ☆11Mar 10, 2024Updated 2 years ago
- ☆11Jul 16, 2018Updated 7 years ago
- LLMA = LLM + Arithmetic coder, which use LLM to do insane text data compression. LLMA=大模型+算术编码,它能使用LLM对文本数据进行暴力的压缩,达到极高的压缩率。☆22Nov 24, 2024Updated last year
- Provides the code for the paper "EBPC: Extended Bit-Plane Compression for Deep Neural Network Inference and Training Accelerators" by Luk…☆18Oct 6, 2019Updated 6 years ago
- Scala staging framework☆18Jul 13, 2018Updated 7 years ago
- 🧮 🔢 Generate multi-sample k-mer count matrix from WGS☆11Jan 17, 2026Updated 5 months ago
- ☆14Aug 25, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An open silicon CHERIoT Ibex microcontroller chip☆18May 23, 2025Updated last year
- Graph Intermediate Representation☆12Dec 21, 2016Updated 9 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆28Sep 13, 2023Updated 2 years ago
- Benchmark of four minimal perfect hash libraries (phf, emphf, CMPH, Sux4J)☆14Apr 6, 2017Updated 9 years ago
- a copy of m^2 's fsbench (https://chiselapp.com/user/Justin_be_my_guide/repository/fsbench/) with the latest density updates☆14Dec 30, 2019Updated 6 years ago
- Make a Docker container from a Python app with a pip requirements.txt file☆14May 1, 2015Updated 11 years ago
- 2048 in c☆23Sep 22, 2025Updated 9 months ago