zaixizhang / STELLALinks
STELLA: Self-Evolving LLM Agent for Biomedical Research
☆60Updated last month
Alternatives and similar repositories for STELLA
Users that are interested in STELLA are comparing it to the libraries listed below
Sorting:
- Evaluation dataset for AI systems intended to benchmark capabilities foundational to scientific research in biology☆94Updated 3 months ago
- ☆52Updated last year
- [ACL 2024] ProtLLM: An Interleaved Protein-Language LLM with Protein-as-Word Pre-Training☆50Updated last year
- OriGene: A Self-Evolving Virtual Disease Biologist for Mechanism-Guided Therapeutic Target Discovery☆176Updated 4 months ago
- BioDiscoveryAgent is an LLM-based AI agent for closed-loop design of genetic perturbation experiments☆92Updated 5 months ago
- ☆42Updated last year
- Official implementation for the paper "Toward Scientific Reasoning in LLMs: Training from Expert Discussions via Reinforcement Learning"☆51Updated 6 months ago
- BioT5 (EMNLP 2023) and BioT5+ (ACL 2024 Findings)☆123Updated last year
- The code for "Learning Molecular Representation in a Cell"☆39Updated 9 months ago
- Benchmark for LLM-based Agents in Computational Biology☆67Updated 2 months ago
- ☆35Updated 4 months ago
- [COLM'24] We propose Protein Chain of Thought (ProCoT), which replicates the biological mechanism of signaling pathways as language promp…☆70Updated last month
- Llamole: Multimodal Large Language Models for Inverse Molecular Design with Retrosynthetic Planning☆37Updated last year
- LLM for Drug Editing, ICLR 2024☆156Updated last year
- Awesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through M…☆238Updated 3 weeks ago
- ☆21Updated 9 months ago
- reasoning model trained using GRPO towards rosetta REF2015 for protein stability☆99Updated 2 months ago
- The Open Source Code for LLM4SD (Large Language Models for Scientific Synthesis, Inference and Explanation)☆122Updated last year
- Code for 'On Pre-trained Language Models For Antibody'☆32Updated 2 years ago
- ☆51Updated 8 months ago
- This is the pipeline of our new article "Enzyme Co-Scientist: Harnessing Large Language Models for Enzyme Kinetic Data Extraction from Li…☆15Updated 7 months ago
- A Biological Foundation Model Bridging the Gap between Molecular Sequences Through Central Dogma☆28Updated 9 months ago
- [ICML 25] We train and evaluate SAEs to identify interpretable features in pLMs and show their potential for scientific discovery.☆121Updated 2 months ago
- Code for CTO: A Large Clinical Trial Outcome and QA Dataset☆28Updated last month
- Large Language Models in Protein: A Comprehensive Survey☆165Updated 8 months ago
- A scientific reasoning model, dataset, and reward functions for chemistry.☆149Updated 2 months ago
- Protein-Nucleic Acid Complex Modeling with Frame Averaging Transformer, NeurIPS2024☆27Updated 7 months ago
- A curated list of LLM powered AI Agents in Biomedical Research. Medical Image Analysis, Multi-omics Genomics Analysis, Biomedical Scienti…☆70Updated 3 months ago
- ☆122Updated last month
- [Briefings in Bioinformatics] A Survey of Generative AI for de novo Drug Design☆94Updated last year