A set of notebooks and other resources regarding my deep learning experiments
☆22Mar 14, 2018Updated 8 years ago
Alternatives and similar repositories for deeplearning-resources
Users that are interested in deeplearning-resources are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 3D segmentation for cells and organoids of 3D multichannel images☆32Jun 24, 2025Updated 10 months ago
- Web Image Processing Pipeline (WIPP)☆27Dec 19, 2025Updated 5 months ago
- Hierarchical Vision Transformers for Disease Progression Detection in Chest X-Ray Images☆11Jan 11, 2024Updated 2 years ago
- This is the code for siggrapha paper "An Implicit Neural Representation for the Image Stack: Depth, All in Focus, and High Dynamic Range"☆15Nov 21, 2024Updated last year
- ☆18Apr 24, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- VISION is a sophisticated software tool specifically designed to analyze and process biological and microscopic images.☆10Jul 25, 2024Updated last year
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆21Nov 18, 2025Updated 6 months ago
- Implementation of multiplex Leiden for analysis of spatial omics data☆18May 7, 2026Updated 2 weeks ago
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- Code for "A decision algorithm to promote outpatient antimicrobial stewardship for uncomplicated urinary tract infection"☆11Jun 27, 2021Updated 4 years ago
- Keras implementation of DeepAnat: Diffusion MRI data analysis assisted by deep learning synthesized anatomical images☆13Feb 9, 2023Updated 3 years ago
- Segmentation-free Analysis of In Situ Capture data☆14Apr 6, 2026Updated last month
- Causal discovery of gene regulatory programs from single-cell genomics☆19Sep 5, 2025Updated 8 months ago
- Bash scripts to simplify your life (let's hope so!)☆12Jul 21, 2025Updated 10 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- some demo to show how to write imagepy plugin☆12Jun 25, 2020Updated 5 years ago
- ☆13Aug 16, 2024Updated last year
- Google Colab notebook for Cellpose☆11Aug 21, 2025Updated 9 months ago
- ATAC-seq lab for BIOINF525☆10Mar 31, 2016Updated 10 years ago
- ☆14Updated this week
- A github action to setup a small SLURM cluster for testing purposes.☆14Jul 20, 2025Updated 10 months ago
- TensorFlow Runtime Tracing Metadata Visualization☆10Sep 11, 2018Updated 7 years ago
- Official PyTorch implementation of DeepLIR.☆15Jun 5, 2025Updated 11 months ago
- analysis tools for large-scale neural recordings☆17Apr 4, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Bioconductor R-package: Curated Prostate Cancer Data☆11Oct 1, 2024Updated last year
- A curated list of Learning resources☆11Mar 16, 2018Updated 8 years ago
- ☆13Apr 27, 2022Updated 4 years ago
- 🔬 MCP server for AI-powered napari control. Connect Claude, ChatGPT, Cursor, and other LLMs to napari for interactive image analysis. Pe…☆34Mar 25, 2026Updated last month
- Code for PCA-OGD (AISTATS 2021)☆11Mar 16, 2021Updated 5 years ago
- Codebase for PhlatCam☆14Mar 5, 2025Updated last year
- UHCA☆11Jan 23, 2025Updated last year
- Software and analysis of metabolism studies across multiple cancer types☆10Sep 5, 2017Updated 8 years ago
- Rust extension module for FIJI-like colormapping and channel blending☆21Mar 31, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A platform for compiling, analyzing, and exploring tracking data☆50Feb 2, 2026Updated 3 months ago
- List of openly available dataset generated by our lab☆14Apr 1, 2026Updated last month
- Meta-Analysis of Medians☆10Apr 18, 2026Updated last month
- ANPELA is a user-centric and application-oriented tool which is capable of navigating the data processing for single-cell proteomics (SCP…☆14Aug 12, 2025Updated 9 months ago
- Code for our paper☆13Jul 26, 2022Updated 3 years ago
- An ImageJ/FIJI plugin for multi-channel Hyperstack alignment (registration)☆13Dec 7, 2022Updated 3 years ago
- Python program to generate NetworkX graphs from segmented images.☆14Apr 14, 2023Updated 3 years ago