Alternatives and similar repositories for biodb

Users that are interested in biodb are comparing it to the libraries listed below

• pauca / RRDKit
  A pragmatic interface to RDKit in R
  ☆26Updated 6 years ago
• CDK-R / cdkr
  Integrating R and the CDK
  ☆44Updated last month
• wkumler / RaMS
  R-based access to Mass-Spectrometry data
  ☆24Updated 3 months ago
• QizhiSu / mspcompiler
  Compile Mass Spectral Libraries from Various Sources
  ☆17Updated last year
• nanxstats / Rcpi
  💊 Molecular informatics toolkit with integration of bioinformatics and cheminformatics tools for drug discovery
  ☆37Updated last year
• schymane / RChemMass
  Various Cheminformatic, Curation and Mass Spectrometry Functions
  ☆15Updated 4 years ago
• kruvelab / MS2Tox
  MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS
  ☆16Updated last month
• oolonek / ISDB
  A database of In-Silico predicted MS/MS spectrum of Natural Products
  ☆15Updated 3 years ago
• cambDI / camb
  ☆13Updated 8 years ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆19Updated last year
• OrgMassSpec / OrgMassSpecR
  Organic/biological mass spectrometry data analysis (development version).
  ☆31Updated 8 years ago
• MassBank / RMassBank
  Playground for experiments on the official http://bioconductor.org/packages/devel/bioc/html/RMassBank.html
  ☆13Updated last month
• dphansti / CORAL
  ☆29Updated 3 years ago
• ODonnell-Lipidomics / LipidFinder
  LipidFinder: A computational workflow for discovery of new lipid molecular species
  ☆21Updated 4 years ago
• vsegurar / DeepMSPeptide
  ☆18Updated 6 years ago
• idslme / IDSL.IPA
  Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…
  ☆15Updated 2 years ago
• rickhelmus / patRoon
  Workflow solutions for mass-spectrometry based non-target analysis.
  ☆68Updated last week
• sneumann / CAMERA
  This is the git repository matching the Bioconductor package CAMERA: Collection of annotation related methods for mass spectrometry data
  ☆14Updated 7 months ago
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆30Updated last year
• oloBion / Retip
  Retip - Retention Time prediction for metabolomics
  ☆32Updated last year
• aberHRML / classyfireR
  R Interface to the ClassyFire REST API
  ☆11Updated 10 months ago
• yguitton / metaMS
  data processing for MS-based metabolomics
  ☆15Updated last year
• phenomecentre / peakPantheR
  On-instrument and post-acquisition targeted feature extraction
  ☆13Updated 3 months ago
• osenan / cliqueMS
  Annotation of in source LC/MS data
  ☆12Updated last year
• mjhelf / Metaboseek
  Interactive software to analyze and browse mass spectrometry data
  ☆21Updated 6 months ago
• stanstrup / PredRet
  Shiny app for retention time prediction
  ☆10Updated last month
• wind22zhu / BioMedR
  generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.
  ☆16Updated 6 years ago
• nathaniel-mahieu / mz.unity
  mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data
  ☆14Updated 9 years ago
• girke-lab / ChemmineR
  Cheminformatics Toolkit for R
  ☆16Updated 3 months ago
• HuanLab / ISFrag
  A bioinformatic tool facilitating automated in-source fragmentation identification
  ☆10Updated 3 years ago