ceabiodb / biodbLinks
An R package framework for accessing biological and chemical databases and developing or extending new connectors.
☆11Updated 2 years ago
Alternatives and similar repositories for biodb
Users that are interested in biodb are comparing it to the libraries listed below
Sorting:
- A database of In-Silico predicted MS/MS spectrum of Natural Products☆15Updated 2 years ago
- Compile Mass Spectral Libraries from Various Sources☆17Updated last year
- A pragmatic interface to RDKit in R☆25Updated 6 years ago
- Various Cheminformatic, Curation and Mass Spectrometry Functions☆14Updated 4 years ago
- MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS☆16Updated last week
- ☆13Updated 8 years ago
- Playground for experiments on the official http://bioconductor.org/packages/devel/bioc/html/RMassBank.html☆13Updated 11 months ago
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆14Updated 2 years ago
- ☆17Updated 6 years ago
- eMetabolomics project: Mass Annotation based on in silico Generated Metabolites☆15Updated 2 years ago
- ☆11Updated 9 months ago
- R-based access to Mass-Spectrometry data☆24Updated last month
- 💊 Molecular informatics toolkit with integration of bioinformatics and cheminformatics tools for drug discovery☆37Updated last year
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆28Updated last year
- Integrating R and the CDK☆44Updated last year
- Repo hosting the MetFrag website☆10Updated 7 months ago
- chemmodlab: A Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models☆17Updated 2 years ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Updated last year
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆20Updated 4 years ago
- generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.☆16Updated 5 years ago
- ☆29Updated 3 years ago
- Organic/biological mass spectrometry data analysis (development version).☆30Updated 8 years ago
- This is the git repository matching the Bioconductor package CAMERA: Collection of annotation related methods for mass spectrometry data☆13Updated 4 months ago
- R Interface to the ClassyFire REST API☆11Updated 6 months ago
- Retip - Retention Time prediction for metabolomics☆32Updated last year
- ☆12Updated 9 months ago
- Elucidate and visualise a compound's mechanism of action by combining structure-based target prediction with gene expression-based causal…☆12Updated 2 years ago
- Tools for analysis of Mass Spectrometry data using the Wasserstein metric☆17Updated 10 months ago
- ☆11Updated 8 months ago
- ☆10Updated 6 years ago