Alternatives and similar repositories for Merlin

Users that are interested in Merlin are comparing it to the libraries listed below

• ibrahimethemhamamci / CT-CLIP
  Developing Generalist Foundation Models from a Multimodal Dataset for 3D Computed Tomography
  ☆325Updated 3 months ago
• StanfordMIMI / MedVAE
  [MIDL 2025] Efficient Automated Interpretation of Medical Images with Large-Scale Generalizable Autoencoders
  ☆143Updated 3 months ago
• ibrahimethemhamamci / CT2Rep
  MICCAI 2024 & CT2Rep: Automated Radiology Report Generation for 3D Medical Imaging
  ☆106Updated last year
• MrGiovanni / RadGPT
  [ICCV 2025] AbdomenAtlas 3.0 (9,262 CT volumes + medical reports). These “superhuman” reports are more accurate, detailed, standardized, …
  ☆156Updated this week
• project-lighter / CT-FM
  CT-FM: A 3D Image-Based Foundation Model for Computed Tomography
  ☆53Updated 8 months ago
• zhaoziheng / SAT
  [npj Digital Medicine] The official repository for "Large-Vocabulary Segmentation for Medical Images with Text Prompts"
  ☆240Updated 2 months ago
• niuchuangnn / M3FM
  ☆47Updated 10 months ago
• AIM-Harvard / foundation-cancer-image-biomarker
  [Nature Machine Intelligence 2024] Code and evaluation repository for the paper
  ☆123Updated 7 months ago
• ibrahimethemhamamci / CT-CHAT
  Developing Generalist Foundation Models from a Multimodal Dataset for 3D Computed Tomography
  ☆83Updated last year
• dalcalab / voxel
  Torch utilities for 3D medical imaging
  ☆49Updated last month
• MrGiovanni / Touchstone
  [NeurIPS 2024] Touchstone - Benchmarking AI on 5,172 o.o.d. CT volumes and 9 anatomical structures
  ☆126Updated last month
• MIC-DKFZ / LesionLocator
  LesionLocator is a framework for zero-shot lesion segmentation and longitudinal tumor tracking in 3D full-body imaging.
  ☆70Updated 3 weeks ago
• ibrahimethemhamamci / GenerateCT
  ECCV 2024 & GenerateCT: Text-Conditional Generation of 3D Chest CT Volumes
  ☆174Updated last year
• alibaba-damo-academy / fvlm
  Fine-grained Vision-language Pre-training for Enhanced CT Image Understanding (ICLR 2025)
  ☆106Updated 6 months ago
• MIC-DKFZ / nnssl
  ☆106Updated 2 weeks ago
• zhaoziheng / SAT-DS
  The official repository to build SAT-DS, a medical data collection of over 72 public segmentation datasets, contains over 22K 3D images, …
  ☆126Updated 2 months ago
• xmindflow / Awesome-Foundation-Models-in-Medical-Imaging
  A curated list of foundation models for vision and language tasks in medical imaging
  ☆277Updated last year
• MrGiovanni / AbdomenAtlas
  [NeurIPS 2023] AbdomenAtlas 1.0 (5,195 CT volumes + 9 annotated classes)
  ☆291Updated 2 months ago
• alibaba-damo-academy / self-supervised-anatomical-embedding-v2
  ☆69Updated last year
• neheller / kits23
  The official repository of the 2023 Kidney Tumor Segmentation Challenge (KiTS23)
  ☆121Updated 2 months ago
• TaWald / nnUNet
  ☆35Updated 2 weeks ago
• charlierabea / FORTE
  The original code for paper "Towards a Holistic Framework for Multimodal LLM in 3D Brain CT Radiology Report Generation"
  ☆42Updated 6 months ago
• echonet / echo_CLIP
  ☆33Updated 8 months ago
• alexanderjaus / AtlasDataset
  ☆46Updated 10 months ago
• WithStomach / MINIM
  ☆134Updated 10 months ago
• MrGiovanni / SuPreM
  [ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)
  ☆373Updated last month
• bwittmann / vesselFM
  A foundation model for universal 3D blood vessel segmentation. Paper accepted @ CVPR25.
  ☆117Updated 4 months ago
• MECLabTUDA / Lifelong-nnUNet
  ☆153Updated last week
• WuLabMDA / Synthetic-PET-from-CT
  ☆21Updated last month
• StanfordMIMI / RoentGen
  ☆65Updated last year