StanfordMIMI / Merlin
Merlin is a 3D VLM for computed tomography that leverages both structured electronic health records (EHR) and unstructured radiology reports for pretraining.
☆73Updated last week
Alternatives and similar repositories for Merlin:
Users that are interested in Merlin are comparing it to the libraries listed below
- Developing Generalist Foundation Models from a Multimodal Dataset for 3D Computed Tomography☆45Updated 5 months ago
- ☆33Updated 2 months ago
- [MIDL 2025] Efficient Automated Interpretation of Medical Images with Large-Scale Generalizable Autoencoders☆37Updated last week
- [Nature Machine Intelligence 2024] Code and evaluation repository for the paper☆104Updated last month
- ☆61Updated last year
- nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points, scribbles, bounding boxes, and la…☆110Updated 3 weeks ago
- AbdomenAtlas 3.0 (9,262 CT volumes + medical reports). These “superhuman” reports are more accurate, detailed, standardized, and generate…☆67Updated 2 months ago
- The official repository of the 2023 Kidney Tumor Segmentation Challenge (KiTS23)☆97Updated last month
- Torch utilities for 3D medical imaging☆33Updated last week
- MICCAI 2024 & CT2Rep: Automated Radiology Report Generation for 3D Medical Imaging☆83Updated 9 months ago
- ☆17Updated 7 months ago
- [ICLR 2025] Learning General-purpose Biomedical Volume Representations using Randomized Synthesis☆29Updated 2 months ago
- ☆68Updated 10 months ago
- Implemention of the Paper "MultiTalent: A Multi-Dataset Approach to Medical Image Segmentation"☆54Updated 4 months ago
- The official repository to build SAT-DS, a medical data collection of over 72 public segmentation datasets, contains over 22K 3D images, …☆92Updated 2 months ago
- Machine learning models for multi-organ, multi-disease prediction in chest CT volumes. From paper Draelos et al. "Machine-Learning-Based …☆34Updated 2 years ago
- [MICCAI2024] Rethinking Abdominal Organ Segmentation (RAOS) in the clinical scenario: A robustness evaluation benchmark with challenging …☆42Updated 8 months ago
- MICCAI 2024: nnUNet incorporating additional baselines as SAMed️, Mamba Variants, and MedNeXT to establish a benchmark for segmentation c…☆80Updated 7 months ago
- ☆39Updated 3 months ago
- ECCV 2024 & GenerateCT: Text-Conditional Generation of 3D Chest CT Volumes☆150Updated 9 months ago
- autoPET TCIA pipeline☆47Updated 2 years ago
- Repository for the Universal Lesion Segmentation Challenge '23☆34Updated 2 weeks ago
- [MICCAI 2022] The official repository of Light-weight spatio-temporal graphs for segmentation and ejection fraction prediction in cardiac…☆34Updated last year
- One-line code to get SoTA pre-trained Medical Image Models ready in PyTorch.☆35Updated 2 weeks ago
- Annotations for the PI-CAI Challenge: Public Training and Development Dataset☆58Updated 6 months ago
- Computed tomography to body composition (Comp2Comp).☆72Updated 3 months ago
- Large Medical Image Foundation Model☆17Updated last year
- LesionLocator is a framework for zero-shot lesion segmentation and longitudinal tumor tracking in 3D full-body imaging.☆23Updated this week
- [EMNLP, Findings 2024] a radiology report generation metric that leverages the natural language understanding of language models to ident…☆45Updated last month
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆81Updated 3 months ago