Brain Extraction Tool in Python
☆44Mar 20, 2025Updated last year
Alternatives and similar repositories for brainextractor
Users that are interested in brainextractor are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13May 21, 2025Updated 11 months ago
- CTseg: A Tool for Brain CT Segmentation, Spatial Normalisation, and Volumetrics☆84Apr 21, 2026Updated last week
- Demonstration of DCE MRI reconstruction☆16Mar 5, 2025Updated last year
- This is a demo code for RF pulses in 2022 ISMRM☆10May 6, 2022Updated 3 years ago
- Source code for FSL: http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/☆28Jan 29, 2016Updated 10 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- MRI brain extraction tool☆410Dec 18, 2024Updated last year
- Extract brain and remove skulls from brain CT and CTA images☆35Jul 3, 2023Updated 2 years ago
- Official code of "Towards General Text-guided Universal Image Synthesis Framework for Customized Multimodal Brain MRI"☆41Nov 1, 2025Updated 6 months ago
- SPM Containers (Docker & Singularity)☆27Sep 16, 2025Updated 7 months ago
- Robust Brain Extraction Tool for CT Head Images☆51Oct 7, 2020Updated 5 years ago
- Tools for dealing with neuroimaging data in the BIDS structure☆28Nov 21, 2018Updated 7 years ago
- Python port of mapVBVD☆55Oct 31, 2024Updated last year
- Demonstration code for the MRM manuscript, "T2 Shuffling: Sharp, Multi-Contrast, Volumetric Fast Spin-Echo Imaging"☆22Jan 13, 2025Updated last year
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆17May 8, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Turn your brain MRI into a printable 3D model in seconds 🧠➡️🖨️☆14Apr 17, 2026Updated 2 weeks ago
- Bayesian U-Net for Keras☆11Dec 28, 2019Updated 6 years ago
- The Midnight Scanning Club Codebase☆41Jun 26, 2019Updated 6 years ago
- Skull stripping and brain tissue segmentation☆121Apr 17, 2019Updated 7 years ago
- Basic minc-tools from former minc repository☆34Apr 23, 2026Updated last week
- ☆22Dec 16, 2025Updated 4 months ago
- ☆12Nov 23, 2021Updated 4 years ago
- ipython notebooks for learning how to use SimpleITK☆14Apr 14, 2017Updated 9 years ago
- Customised Keras' ImageDataGenerator for 3D volumetric medical image☆25Oct 21, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Self-supervised Longitudinal Neighbourhood Embedding (LNE), MICCAI2021 & Speicial Issue on Medical Image Analysis☆34Mar 2, 2023Updated 3 years ago
- A complete pipelined automatic process for skull stripping and tumor segmentation from Brain MRI using Thresholding.☆14Jun 1, 2021Updated 4 years ago
- Fast brain extraction using neural networks☆50Jul 23, 2024Updated last year
- A tool for reorienting and cropping MRI data☆11Jan 27, 2026Updated 3 months ago
- Code for magnetic susceptibility source separation☆31Sep 16, 2025Updated 7 months ago
- ☆13May 11, 2024Updated last year
- A python/Pytorch re-implementation of several classical Magnetic Resonance Imaging (MRI) reconstruction algorithms☆39Nov 28, 2023Updated 2 years ago
- This is the code corresponding to our publication introducing ConvDecoder with physics-based regularization (CD+r) for MRI☆10Feb 6, 2026Updated 2 months ago
- Matlab/octave tool to read twix raw data from Siemens MRI scanners.☆48Jul 16, 2025Updated 9 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆38Mar 21, 2025Updated last year
- This project is an end-to-end deep learning pipeline for lung cancer detection using 3D CT scan data.☆16Oct 18, 2024Updated last year
- ☆15Apr 7, 2024Updated 2 years ago
- Tool for flashing BL702 mcu.☆15Apr 13, 2023Updated 3 years ago
- MProtoNet: A Case-Based Interpretable Model for Brain Tumor Classification with 3D Multi-parametric Magnetic Resonance Imaging☆15Nov 22, 2023Updated 2 years ago
- ☆16Apr 10, 2026Updated 2 weeks ago
- This repository applies the affine and deformation transformation on the CT scan in the subject space, and register it to the MNI 1mm spa…☆15May 6, 2024Updated last year