vanandrew / brainextractor
Brain Extraction Tool in Python
☆40Updated last month
Alternatives and similar repositories for brainextractor:
Users that are interested in brainextractor are comparing it to the libraries listed below
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆72Updated 9 months ago
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆32Updated last month
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆38Updated 2 months ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆11Updated 10 months ago
- Pre-trained models and utilities for deep learning on medical images in Python☆215Updated last week
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆13Updated last month
- Various mri conversion/modification scripts☆22Updated last year
- AssemblyNet: 3D Whole Brain MRI segmentation pipeline☆58Updated last year
- MIRTK based SVR reconstruction☆50Updated 3 weeks ago
- A project to provide custom sorting and renaming of dicom files☆78Updated 10 months ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆98Updated last month
- White matter tractography clustering and more...☆76Updated last month
- A framework for joint super-resolution and image synthesis, without requiring real training data☆160Updated last year
- NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.☆147Updated 3 years ago
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆16Updated 9 months ago
- ☆28Updated last year
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆35Updated 3 years ago
- AICONSlab's brain extraction (skull-stripping) algorithm using CNNs☆18Updated 6 months ago
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆49Updated last week
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆50Updated 9 months ago
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆34Updated last month
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆68Updated this week
- ☆10Updated 3 years ago
- Multi-site dMRI harmonization☆47Updated this week
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆105Updated 5 months ago
- ☆28Updated 11 months ago
- AICONSlab's hippocampal segmentation algorithm using CNNs☆31Updated 6 months ago
- Library for generating images by sampling a GMM conditioned on label maps☆25Updated last year
- Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet☆27Updated 6 months ago
- FetalSynthSeg Code☆12Updated last month