albertclerigues / stroke-core-ct-segmentationLinks
Docker for running stroke lesion core segmentation
☆12Updated 6 years ago
Alternatives and similar repositories for stroke-core-ct-segmentation
Users that are interested in stroke-core-ct-segmentation are comparing it to the libraries listed below
Sorting:
- This code is used to automatically segment the left and right ventricles on bSSFP cardiac MRI. The aim of my project is to use these vent…☆10Updated 4 years ago
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆17Updated 8 months ago
- Cranial 4D Flow Analysis Tool☆14Updated 2 months ago
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆36Updated 10 months ago
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆40Updated 5 months ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆84Updated last month
- ISBI 2023 - A Registration- and Uncertainty-based Framework for White Matter Tract Segmentation with Only One Annotated Subject☆10Updated 2 years ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆109Updated 5 months ago
- CT Perfusion Toolbox☆27Updated 3 years ago
- FetalSynthSeg Code☆15Updated 10 months ago
- Standardized Environment for Radiomics Analysis☆26Updated 6 years ago
- The easiest tool for experimenting with radiomics features.☆41Updated last year
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆13Updated 5 months ago
- This repository contains the code used for the paper "Towards automated brain aneurysm detection in TOF-MRA: open data, weak labels, and …☆38Updated 2 years ago
- FastSurfer Lesion Inpainting Tool (FastSurfer-LIT) for lesion inpainting e.g. for whole brain segmentation and cortical surface reconstru…☆18Updated 2 months ago
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆13Updated 10 months ago
- Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)☆247Updated this week
- CNN based brain masking☆19Updated 7 months ago
- Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhanceme…☆208Updated 7 years ago
- This repository employs a deep-learning method for the automated segmentation of total metabolic tumor volume (TMTV) in whole-body [18]F-…☆23Updated 10 months ago
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆98Updated 4 months ago
- iBEAT V2.0 Docker☆14Updated 2 weeks ago
- Brain Extraction Tool in Python☆43Updated 10 months ago
- The project is used to do preprocessing on brain MR images by using Nipype.☆40Updated last year
- Example docker containers for the WMH Segmentation Challenge☆22Updated 5 years ago
- Automated deep-learning based brain tumor segmentation on MRI☆37Updated 3 years ago
- Visualization for radiomics feature generated by pyradiomics☆53Updated last year
- Deep Learning Registration of the Prostate☆56Updated last year
- Extract and evaluate radiomics for liver cancer tumors from DICOM segmentation masks. Using SimpleITK, PyRadiomics and PyDicom.☆28Updated 3 weeks ago
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆84Updated 3 years ago