uc-cdis / peregrine

Related projects: ⓘ

• uc-cdis / data-portal
  Windmill: data portal for metadata submission and query
  ☆27Updated this week
• uc-cdis / sheepdog
  API for herding data submissions
  ☆11Updated this week
• uc-cdis / compose-services
  Deploy Gen3 using Docker compose
  ☆14Updated 2 months ago
• uc-cdis / fence
  AuthN/AuthZ OIDC Service
  ☆37Updated this week
• uc-cdis / indexd
  Index service server
  ☆20Updated this week
• EBISPOT / DUO
  Ontology for consent codes and data use requirements
  ☆64Updated last year
• ga4gh / data-repository-service-schemas
  A repository for the schemas used for the Data Repository Service.
  ☆60Updated last week
• phenopackets / phenopacket-schema
  Repository for the GA4GH phenopacket schema
  ☆75Updated 2 months ago
• openelimu / VCF-2-FHIR
  ☆10Updated this week
• OHDSI / Genomic-CDM
  Repository for development of the genomic module of the CDM.
  ☆19Updated 5 years ago
• dockstore / dockstore
  An app store for scientific workflows, tools, notebooks, and services
  ☆119Updated this week
• ga4gh / data-security
  This is the repository for the GA4GH Data Security Work Stream, containing AAI and DSIP.
  ☆22Updated 3 weeks ago
• NCI-GDC / gdcdictionary
  Data dictionary for the GDC
  ☆50Updated this week
• uc-cdis / gen3.org
  The website for gen3.org
  ☆11Updated this week
• ga4gh-beacon / specification
  GA4GH Beacon specification.
  ☆32Updated last year
• ga4gh / wiki
  a place for GA4GH-related wiki pages
  ☆15Updated 7 years ago
• uc-cdis / cloud-automation
  Automation for standing up Gen3 commons
  ☆41Updated this week
• transmart / transmartApp
  tranSMART is a knowledge management platform that enables scientists to develop and refine research hypotheses by investigating correlati…
  ☆71Updated 6 years ago
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆50Updated this week
• uc-cdis / gen3sdk-python
  Gen3 SDK for Python
  ☆12Updated last week
• phenopackets / phenopacket-format
  ☆26Updated 5 years ago
• monarch-initiative / loinc2hpo
  Java library to map LOINC-encoded test results to Human Phenotype Ontology
  ☆29Updated 8 months ago
• monarch-initiative / dipper
  Data Ingestion Pipeline for Monarch
  ☆57Updated last year
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆82Updated 2 months ago
• NIH-NCPI / fhir-101
  🔥 FHIR 101 - A Practical Guide
  ☆37Updated 3 years ago
• common-workflow-language / workflow-service
  Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows
  ☆36Updated 2 months ago
• phenotips / phenotips
  The open-source version of PhenoTips is no longer maintained. PhenoTips makes it simple to record clinical findings observed in patients …
  ☆102Updated 2 years ago
• elixir-cloud-aai / cwl-WES
  Trigger CWL workflows via GA4GH WES and TES
  ☆16Updated last month
• AG-Boerries / MIRACUM-Pipe
  Whole exome sequencing pipeline including advanced variant annotation features and automated PDF reporting.
  ☆14Updated 3 months ago
• NCI-GDC / gdcdatamodel
  Translation layer between the GDC Data Dictionary and psqlgraph
  ☆28Updated 5 months ago