braincharter / vasculature
Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
☆49Updated 2 years ago
Alternatives and similar repositories for vasculature:
Users that are interested in vasculature are comparing it to the libraries listed below
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆24Updated last month
- ☆15Updated 4 months ago
- a tool to segment the hypothalamus and associated subunits on T1-weighted MRI scans☆25Updated 2 years ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆65Updated 2 weeks ago
- Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…☆23Updated 3 months ago
- ☆27Updated 9 months ago
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆45Updated 3 years ago
- Multi-site dMRI harmonization☆47Updated last month
- Segmentations of Neuroanatomy on Hi-Res T1 and T2 MRIs and publicly available population averages in MNI space☆31Updated 2 years ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆62Updated this week
- DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning☆53Updated 3 weeks ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆51Updated last week
- Preprocessing of arterial spin labeling (ASL) data☆47Updated 2 weeks ago
- Processing tools for high-resolution neuroimaging☆71Updated 3 months ago
- Python utilities for medical image and surface-based analysis☆29Updated 2 months ago
- dMRI based fiber tracking using parallel transport tractography☆25Updated this week
- niimath - a clone of fslmaths. Try the live demo:☆59Updated 2 months ago
- perivascular space segmentation☆14Updated 2 years ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline Version 2☆19Updated 3 weeks ago
- Version 2 of the minc-toolkit, uses tools based on ITK version 4.x☆53Updated 3 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆66Updated last year
- LGI: Cortical Shape-Adaptive Local Gyrification Index☆11Updated 4 years ago
- White matter tractography clustering and more...☆71Updated last month
- Segmentation of the thalamus into 11 nuclei and MTT using white-matter-nulled MPRAGE MRI image contrast with support now for standard MPR…☆23Updated last week
- ORG Fiber Clustering White Matter Atlas☆26Updated last year
- 3D Image Viewer with ROI tools for Matlab ( NIFTI viewer, Manual segmentation )☆44Updated 6 months ago
- Convert tractography studies from mrtrix into dicom for use in navigation software☆15Updated this week
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆46Updated 7 months ago
- ☆28Updated last year
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆31Updated 4 years ago