A python package for performing single NMF and joint NMF algorithms
☆14Aug 14, 2023Updated 2 years ago
Alternatives and similar repositories for bignmf
Users that are interested in bignmf are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Block coordinate descent for Sparse NMF☆14Oct 13, 2019Updated 6 years ago
- Experiments to run single cell analyses efficiently at scale using Zarr, anndata, Scanpy, and Apache Spark☆15Mar 28, 2019Updated 7 years ago
- scAce: an adaptive embedding and clustering method for scRNA-seq data☆12Sep 8, 2023Updated 2 years ago
- 1) SimRank (single pair query, parallel all pair computation / dynamic updates) - by Yue Wang (https://github.com/KeithYue) and Yulin Che…☆14Aug 29, 2020Updated 5 years ago
- ☆14Feb 12, 2026Updated 2 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- This is a read-only mirror of the CRAN R package repository. timeROC — Time-Dependent ROC Curve and AUC for Censored Survival Data☆10Apr 10, 2026Updated 3 weeks ago
- A Spatial Transcriptomics Geospatial Profile Recovery System Tool through Anchors☆19Jul 24, 2025Updated 9 months ago
- scripts for analyzing data of macrophage development in human☆10Dec 8, 2019Updated 6 years ago
- We present a customizable computational tool, PathSeq2.0, to enable the discovery and identification of microbial sequences in metagenomi…☆12Jan 20, 2018Updated 8 years ago
- ☆15Jun 11, 2018Updated 7 years ago
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆10Aug 4, 2020Updated 5 years ago
- ☆13Aug 11, 2023Updated 2 years ago
- A tutorial on NMFreg applied to cerebellum data.☆12Apr 7, 2020Updated 6 years ago
- A library for GNN-based recommendation system.☆21Mar 18, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Fast and robust feature-based stitching algorithm for microscopic images☆17Jun 28, 2024Updated last year
- [deprecated: use ujson or orjson instead] Ultra fast JSON decoder and encoder written in C with Python bindings and NumPy bindings☆14Feb 14, 2020Updated 6 years ago
- 单细胞转录组实战☆13Jul 9, 2019Updated 6 years ago
- Public collaboration of Scalable Single Cell Analytics☆12Nov 21, 2017Updated 8 years ago
- Supplementary to "Data visualization for inference in tomographic brain imaging"☆10Sep 30, 2019Updated 6 years ago
- Code helper for BEETL competition☆12Sep 11, 2021Updated 4 years ago
- Light package for connectivity estimation and analysis of neuroimaging data (e.g. fMRI). It relies on the multivariate Ornstein-Uhlenbeck…☆13Jan 30, 2026Updated 3 months ago
- ☆16Mar 2, 2023Updated 3 years ago
- Preprocessing pipeline for (sc)ATAC data☆10Feb 22, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- CRAN R package: Impute missing values based on automated variable selection☆16Jul 21, 2021Updated 4 years ago
- ☆19May 5, 2021Updated 4 years ago
- A relabeling tool for tiled segmentation with Dask☆17Sep 24, 2024Updated last year
- Code for WACV 2022 paper "Generalized Clustering and Multi-Manifold Learning with Geometric Structure Preservation"☆20Dec 16, 2022Updated 3 years ago
- STAR, cufflinks, cluster, DESeq2, GO analysis☆14Jun 27, 2020Updated 5 years ago
- Scope2Screen is an open-source web-application for focus+context exploration and annotation of whole-slide, high-plex, tissue images.☆15Jun 1, 2023Updated 2 years ago
- functions and algorithms for single cell RNA-seq analyses☆11Jan 26, 2021Updated 5 years ago
- ☆18Apr 17, 2025Updated last year
- A package, and script, to perform imaging transcriptomics on a neuroimaging scan.☆16Jul 1, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Rust matrix multiplication benchmarks☆20Nov 22, 2022Updated 3 years ago
- ☆12Oct 28, 2022Updated 3 years ago
- A custom HTML5 <canvas> rendering context that provides HDR color support (32-bit float per channel) and other features like Blending Mod…☆30Apr 22, 2013Updated 13 years ago
- A collection of functional and scientific icons for EMBL-EBI sites.☆17Feb 14, 2020Updated 6 years ago
- C++ library for decoding IEX exchange pcap files☆15Nov 1, 2018Updated 7 years ago
- Notes from the book 'The Elements of Statistical Learning'☆21Jun 20, 2025Updated 10 months ago
- Learning disentangled representations of single-cell data for high-quality generation☆16Mar 16, 2024Updated 2 years ago