srikash / presurferLinks
Scripts to prepare MP2RAGE for Freesurfer
☆29Updated 2 years ago
Alternatives and similar repositories for presurfer
Users that are interested in presurfer are comparing it to the libraries listed below
Sorting:
- Preprocessing of arterial spin labeling (ASL) data☆51Updated this week
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆55Updated this week
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆65Updated last month
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆79Updated 3 months ago
- Preprocessing of diffusion MRI☆167Updated this week
- Automated Fiber Quantification☆77Updated last year
- SPM implementation of https://github.com/JosePMarques/MP2RAGE-related-scripts☆11Updated last year
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆30Updated last year
- Computational Anatomy Toolbox for SPM12 or SPM25☆37Updated last week
- Bash script to compute DTI-ALPS☆63Updated last month
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆41Updated 3 years ago
- Processing tools for high-resolution neuroimaging☆72Updated 11 months ago
- Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM…☆25Updated last year
- BIDS app wrapping recon-all from FreeSurfer☆43Updated last month
- DICOM to NIfTI conversion, NIfTI tools☆102Updated 2 months ago
- ☆39Updated 3 years ago
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆31Updated last year
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆52Updated last year
- A graphical multivariate lesion-symptom mapping toolbox☆11Updated 2 months ago
- The SHiVAi pipeline for preprocessing, AI-based segmentation, and reporting of cCVSD biomarkers from brain MRI images☆19Updated 5 months ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆77Updated 4 years ago
- niimath - a clone of fslmaths. Try the live demo:☆70Updated last week
- Synthetic BOLD images for distortion correction of fMRI without additional calibration scans☆28Updated 3 months ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆73Updated 2 weeks ago
- Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter☆16Updated 2 years ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆46Updated last week
- Stand alone fMRI software suite for layer-fMRI analyses.☆102Updated 2 weeks ago
- Please visit our new location: https://github.com/tractometry/pyAFQ☆59Updated last year
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆19Updated 6 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆71Updated 2 weeks ago