chrisby / ml-on-fhirLinks
A work in progress library that fuses the HL7 FHIR standard with scikit-learn
☆21Updated 2 years ago
Alternatives and similar repositories for ml-on-fhir
Users that are interested in ml-on-fhir are comparing it to the libraries listed below
Sorting:
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.☆51Updated last week
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆45Updated last year
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆85Updated last month
- The Simple EMR System is a rapidly deployable and readily customizable electronic medical record (EMR) user interface for supporting labo…☆19Updated last month
- Robust de-identification of medical notes using transformer architectures☆54Updated 3 years ago
- Query FHIR apis with SQL, for analytics and ML.☆25Updated 4 years ago
- FHIR to pandas dataframe for data analytics, AI and ML!☆42Updated last week
- ☆29Updated 4 years ago
- FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured informat…☆71Updated 2 months ago
- Transforms OWL ontologies into FHIR code systems.☆22Updated 2 years ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- A corpus of textual data corresponding to synthetic clinical encounters, including each encounters’ dialogue transcript and clinical note…☆40Updated 2 years ago
- Sentence tokenizer for clinical/medical text.☆28Updated last year
- An open source automl library for using machine learning in healthcare.☆122Updated last year
- A generator of synthetic psychiatric notes.☆17Updated 5 years ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆61Updated 3 years ago
- pharmpy is an umbrella library for searching the FDA NDC directory, Established Pharmacologic Class (EPC), Anatomical Therapeutic Chemica…☆16Updated 5 years ago
- ☆35Updated 6 years ago
- A deidentifier / deidentification pipeline developed by Stanford and Penn as part of the MIDRC organization.☆92Updated last year
- Python 3 classes to handle clinical trial data from ClinicalTrials.gov and other services☆15Updated 10 years ago
- ☆23Updated 5 years ago
- Standard Health Record Collaborative☆22Updated last year
- python library for graphical and continuous representations of ICD9 and ICD10 codes☆41Updated 9 months ago
- Converts DICOM Resources to FHIR Resources☆22Updated 4 years ago
- Standardization tool for healthcare data☆54Updated 2 years ago
- CliniDeID automatically de-identifies clinical text notes according to the HIPAA Safe Harbor method. It accurately finds identifiers and …☆10Updated 2 years ago
- FHIR Ontop OMOP Implementation☆20Updated last year
- Distributed, fault tolerant batch processing for Natural Language Applications and Search, using remote partitioning☆47Updated 2 years ago
- More realistic synthetic medication data.☆16Updated 2 years ago
- ☆23Updated 2 years ago