Alternatives and similar repositories for ml-on-fhir

Users that are interested in ml-on-fhir are comparing it to the libraries listed below

• dermatologist / pyomop
  Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.
  ☆54Updated this week
• CogStack / MedCATtrainer
  A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
  ☆85Updated 3 months ago
• ebegoli / SynthNotes
  A generator of synthetic psychiatric notes.
  ☆17Updated 5 years ago
• arkhn-oss / FHIR2Dataset
  Query FHIR apis with SQL, for analytics and ML.
  ☆25Updated 4 years ago
• BD2KOnFHIR / NLP2FHIR
  NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications
  ☆61Updated 3 years ago
• obi-ml-public / ehr_deidentification
  Robust de-identification of medical notes using transformer architectures
  ☆56Updated 3 years ago
• UMEssen / FHIR-PYrate
  FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured informat…
  ☆72Updated last week
• ajk77 / SimpleEMRSystem
  The Simple EMR System is a rapidly deployable and readily customizable electronic medical record (EMR) user interface for supporting labo…
  ☆19Updated this week
• rcolinp / clinical_informatics_umls
  An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…
  ☆48Updated last year
• asappresearch / clip
  ☆29Updated 4 years ago
• CogStack / CogStack-SemEHR
  Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research
  ☆89Updated 2 years ago
• LinuxForHealth / dicom-fhir-converter
  Converts DICOM Resources to FHIR Resources
  ☆22Updated 5 years ago
• arkhn-oss / pyrog
  Standardization tool for healthcare data
  ☆54Updated 3 years ago
• yubin-park / pharmpy
  pharmpy is an umbrella library for searching the FDA NDC directory, Established Pharmacologic Class (EPC), Anatomical Therapeutic Chemica…
  ☆17Updated 5 years ago
• dermatologist / fhiry
  FHIR to pandas dataframe for data analytics, AI and ML!
  ☆43Updated this week
• standardhealth / standardhealth.github.io
  Standard Health Record Collaborative
  ☆22Updated last year
• omoponfhir / omoponfhir-main
  Main OMOPonFHIR Settings
  ☆46Updated 3 years ago
• SoftwareCountry / Perseus
  ☆29Updated 2 years ago
• synthetichealth / syntheticmass
  ☆35Updated 6 years ago
• fhircat / FHIROntopOMOP
  FHIR Ontop OMOP Implementation
  ☆20Updated last year
• uf-hobi-informatics-lab / NLPreprocessing
  A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization
  ☆32Updated last year
• CogStack / CogStack-Pipeline
  Distributed, fault tolerant batch processing for Natural Language Applications and Search, using remote partitioning
  ☆47Updated 2 years ago
• arkhn-oss / fhir-river
  Live ETL pipeline to standardize Health Data into FHIR.
  ☆41Updated 3 years ago
• nazrulworld / fhirpath
  FHIRPath implementation in Python.
  ☆34Updated 2 years ago
• dermatologist / hephaestus
  Hephaestus - ETL and ML tools for OHDSI - OMOP CDM
  ☆13Updated 2 months ago
• samschifman / RAG_on_FHIR
  Work on using Retrieval-Augmented Generation (RAG) to combine Fast Healthcare Interoperable Resources (FHIR) with Generative AI.
  ☆111Updated last year
• OHDSI / Perseus
  [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack
  ☆38Updated 2 years ago
• drivendataorg / snomed-ct-entity-linking-runtime
  Runtime repository for the SNOMED CT Entity Linking challenge on DrivenData
  ☆14Updated last year
• VectorInstitute / cyclops
  A toolkit for evaluating and monitoring AI models in clinical settings
  ☆87Updated this week
• MIDRC / Stanford_Penn_MIDRC_Deidentifier
  A deidentifier / deidentification pipeline developed by Stanford and Penn as part of the MIDRC organization.
  ☆96Updated 2 weeks ago