chrisby / ml-on-fhir
A work in progress library that fuses the HL7 FHIR standard with scikit-learn
☆20Updated last year
Alternatives and similar repositories for ml-on-fhir:
Users that are interested in ml-on-fhir are comparing it to the libraries listed below
- Vocabulary lookup tool for LLMs (and humans)☆12Updated 2 years ago
- pharmpy is an umbrella library for searching the FDA NDC directory, Established Pharmacologic Class (EPC), Anatomical Therapeutic Chemica…☆16Updated 4 years ago
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Updated 2 years ago
- More realistic synthetic medication data.☆16Updated 2 years ago
- Converts DICOM Resources to FHIR Resources☆21Updated 4 years ago
- An NLP pipeline for COVID-19 surveillance used in the Department of Veterans Affairs Biosurveillance.☆15Updated 2 years ago
- ☆13Updated 9 years ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆43Updated 2 weeks ago
- A repository of all code and resources of my published blog articles.☆24Updated last week
- ☆20Updated 2 years ago
- Query FHIR apis with SQL, for analytics and ML.☆25Updated 3 years ago
- Python 3 classes to handle clinical trial data from ClinicalTrials.gov and other services☆15Updated 9 years ago
- Runtime repository for the SNOMED CT Entity Linking challenge on DrivenData☆14Updated last year
- Pilot model and converter for integration of radiology data into OMOP-CDM☆22Updated 5 years ago
- The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)☆24Updated 4 years ago
- Tools to create a clinical knowledge graph from biomedical literature. Includes wrappers for NCBI Eutils, cTakes annotator and Neo4J☆16Updated 9 months ago
- Jupyter Notebooks and other code for 4CE data visualizations.☆13Updated 2 years ago
- Common clinical models in the forms of openEHR archetypes and GDL guidelines☆37Updated 4 months ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆43Updated last year
- Use machine learning to find patterns of similar eligibility protocol criteria for clinical trials☆18Updated 6 years ago
- This project develops compact transformer models tailored for clinical text analysis, balancing efficiency and performance for healthcare…☆18Updated last year
- ☆16Updated 2 years ago
- FHIR Resources/Elements for Python☆12Updated 4 years ago
- Awesome Orchest projects, both official and submitted by the community.☆25Updated last year
- ☆29Updated 3 years ago
- Website for ML4H Symposium☆22Updated 10 months ago
- An Interactive Tool for Natural Language Processing on Clinical Text☆22Updated 3 years ago
- Machine learning on electronic health records☆11Updated 7 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- The Simple EMR System is a rapidly deployable and readily customizable electronic medical record (EMR) user interface for supporting labo…☆19Updated 9 months ago