chrisby / ml-on-fhir
A work in progress library that fuses the HL7 FHIR standard with scikit-learn
☆20Updated last year
Related projects: ⓘ
- Vocabulary lookup tool for LLMs (and humans)☆12Updated last year
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Updated last year
- Converts DICOM Resources to FHIR Resources☆18Updated 3 years ago
- ☆15Updated 4 years ago
- Standard Health Record Collaborative☆22Updated last month
- FHIR to pandas dataframe for data analytics, AI and ML!☆32Updated this week
- Website for ML4H Symposium☆22Updated 3 months ago
- The Simple EMR System is a rapidly deployable and readily customizable electronic medical record (EMR) user interface for supporting labo…☆18Updated 2 months ago
- pharmpy is an umbrella library for searching the FDA NDC directory, Established Pharmacologic Class (EPC), Anatomical Therapeutic Chemica…☆15Updated 3 years ago
- An Interactive Tool for Natural Language Processing on Clinical Text☆22Updated 3 years ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆36Updated last week
- This project develops compact transformer models tailored for clinical text analysis, balancing efficiency and performance for healthcare…☆18Updated 5 months ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆26Updated 3 months ago
- ☆13Updated 6 years ago
- Tools to create a clinical knowledge graph from biomedical literature. Includes wrappers for NCBI Eutils, cTakes annotator and Neo4J☆15Updated 2 months ago
- UMLS Graph database for semantic queries☆19Updated last year
- A curated list of awesome resources at the intersection of healthcare and AI☆59Updated 11 months ago
- Source code of ME2Vec.☆13Updated last year
- Medication Reconciliation algorithm☆27Updated 10 years ago
- Python 3 classes to handle clinical trial data from ClinicalTrials.gov and other services☆15Updated 9 years ago
- More realistic synthetic medication data.☆12Updated last year
- Common clinical models in the forms of openEHR archetypes and GDL guidelines☆38Updated last year
- Robust de-identification of medical notes using transformer architectures☆42Updated 2 years ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆32Updated 6 months ago
- FHIR Resources/Elements for Python☆12Updated 4 years ago
- clinical free text de-identification software☆41Updated 5 years ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆59Updated 2 years ago
- Build a medical knowledge graph based on Unified Language Medical System (UMLS)☆17Updated 2 years ago
- The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)☆24Updated 3 years ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆20Updated 3 years ago