phylo2vec: a library for vector-based phylogenetic tree manipulation
☆21Nov 3, 2026Updated this week
Alternatives and similar repositories for phylo2vec
Users that are interested in phylo2vec are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees☆12Sep 6, 2023Updated 3 years ago
- rSPR is a software package for calculating rooted subtree-prune-and-regraft distances and rooted agreement forests.☆13Jan 2, 2024Updated 2 years ago
- Research Software Engineering Plugins for Coding Agents☆32Oct 31, 2026Updated last week
- Python language bindings for bwa☆13Jul 19, 2026Updated 3 months ago
- Code for learnable topological features for phylogenetic inference via graph neural networks☆11Mar 3, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Fast implementation of the Neighbour-Joining method for phylogenetic inference☆21Sep 10, 2024Updated 2 years ago
- Community Seafloor Global Navigation Satellite Systems - Acoustic (GNSS-A) Transponder Surveying Software☆17Updated this week
- Benchmark empirical datasets for phylogenetic method development☆20Dec 5, 2023Updated 2 years ago
- An R package for Bayes Linear emulation and history matching.☆20Oct 30, 2026Updated last week
- ☆21Updated this week
- Probability distributions for Rust with a simple API, performance, and deterministic sampling.☆13Nov 9, 2025Updated 11 months ago
- Repository to the R package nowcaster, nowcasting with INLA☆25Sep 18, 2026Updated last month
- Trait BLUP, a feature selection approach for genomic prediction☆11Nov 14, 2018Updated 7 years ago
- cool BED-to-GFF3 converter that runs in parallel☆10Apr 17, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- All codes associated with MendelPeaG2P project☆13Mar 5, 2025Updated last year
- A collection of WDL bioinformatic workflows to benchmark markers coming from different pipelines using linkage map quality as a diagnosis…☆11Sep 24, 2025Updated last year
- Ultrafast and powerful eGene identification method☆10Jul 17, 2025Updated last year
- Tutorial for bulk segregant analysis using Python☆11Mar 16, 2021Updated 5 years ago
- A remake of the classic DX-Ball built with OpenGL and SDL2☆10Jun 27, 2023Updated 3 years ago
- This Repository contains materials to learn mixed models, dissect it to extract BLUEs and BLUPs☆12Sep 7, 2025Updated last year
- Graph Variant Benchmarking for the HPRC2☆12May 26, 2026Updated 5 months ago
- Description of hantavirus cases for the 2026 human outbreak☆20Sep 15, 2026Updated last month
- Genetic Linkage Maps in Autopolyploids v 2.0☆10Jun 13, 2026Updated 4 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Presentations from the "Introduction to Genomics" lecture series on the Genomics Boot Camp channel on YouTube.☆12Apr 19, 2022Updated 4 years ago
- Adaptive parallel tempering for Beast2☆12Jul 13, 2026Updated 3 months ago
- Slides for short course on 'omics assisted breeding methods☆13Nov 15, 2018Updated 7 years ago
- Knockoff-based analysis of GWAS summary statistics data☆11Updated this week
- Evodictor is a software package for learning patterns and predicting the future of evolution by gain/losses of given traits☆14Sep 27, 2024Updated 2 years ago
- Rust crate for Quadbin spatial indexing☆10Mar 3, 2026Updated 8 months ago
- Chatterbox-Flash: Extending Chatterbox with Block Diffusion for Fast Speech Generation☆16Jun 1, 2026Updated 5 months ago
- A pipeline to use Lep-Map3 to create linkage maps and LepAnchor for anchoring and orienting genome assemblies with said linkage maps.☆16Jun 24, 2025Updated last year
- ggplot2-based Manhattan plot☆13Oct 18, 2022Updated 4 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Analyzing the data produced by the World Health Organization on the 2022 mpox outbreak☆16May 26, 2026Updated 5 months ago
- An R package for plotting GWAS results from the GAPIT package☆14Updated this week
- Tutorial about how to use sphinx to automatically generate documentation☆10Jan 14, 2018Updated 8 years ago
- All tutorials of lightoj online judge that are found, added in this repositories .☆12Jan 29, 2021Updated 5 years ago
- Pipeline for linkage map construction from NGS data☆13Feb 10, 2023Updated 3 years ago
- Joint estimation of incubation period, transmission timing, and R(t) for the Epuyén ANDV outbreak☆10Sep 22, 2026Updated last month
- A script for converting python code to a UML-style class diagram☆12Jul 5, 2011Updated 15 years ago