ChantalMP / Unsupervised_pre-training_of_graph_transformers_on_patient_population_graphs
Official github repository for the paper "Unsupervised pre-training of graph transformers on patient population graphs"
☆13Updated last year
Alternatives and similar repositories for Unsupervised_pre-training_of_graph_transformers_on_patient_population_graphs:
Users that are interested in Unsupervised_pre-training_of_graph_transformers_on_patient_population_graphs are comparing it to the libraries listed below
- A Multimodal Transformer: Fusing Clinical Notes With Structured EHR Data for Interpretable In-Hospital Mortality Prediction☆31Updated 2 years ago
- ☆12Updated 3 years ago
- ☆33Updated last year
- ☆24Updated 5 years ago
- 🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…☆67Updated 2 weeks ago
- ☆38Updated 5 years ago
- Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.☆83Updated 2 years ago
- ☆22Updated 3 years ago
- Experiments applying FIDDLE on MIMIC-III and eICU. https://doi.org/10.1093/jamia/ocaa139☆24Updated 2 years ago
- DescEmb - Unifying Heterogenous Electronic Health Records Systems via Text-Based Code Embedding☆21Updated last week
- [ML4H 2022] This is the code for our paper `Counterfactual and Factual Reasoning over Hypergraphs for Interpretable Clinical Predictions …☆24Updated last year
- Patient Code & Text Representation Learning☆20Updated last year
- Source code for a comprehensive analysis of MTL over EHR timeseries data.☆37Updated 2 years ago
- python code for BRLTM model☆13Updated 4 years ago
- source codes based on PyTorch to analyze EHR☆136Updated last year
- This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…☆118Updated last year
- The official implementation of TContext-GGAN☆14Updated 3 years ago
- Repository for the HiRID ICU Benchmark (HiB) project☆54Updated last year
- This repository contains the code used for Temporal Pointwise Convolutional Networks for Length of Stay Prediction in the Intensive Care …☆78Updated 3 weeks ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆92Updated 10 months ago
- Official implementation for paper "Predictive Modeling with Temporal Graphical Representation on Electronic Health Records"☆21Updated 11 months ago
- Taking off-the-shelf HuggingFace models and training them on EHR data☆24Updated last month
- Repository for the paper 'MDS-ED: Multimodal Decision Support in the Emergency Department – a benchmark dataset based on MIMIC-IV'.☆18Updated last week
- COVID-19 EHR data analysis pipeline☆20Updated 4 months ago
- ☆34Updated last year
- A simple implementation of the paper "Disease Prediction via Graph Neural Networks".☆22Updated 4 years ago
- ☆49Updated 3 years ago
- circEWS public code☆68Updated 6 months ago
- Code repository to create the MIMIC-CDM Dataset.☆31Updated 3 months ago
- This repository is a PyTorch implementation of our NeurIPS 2022 paper "Debiased, Longitudinal and Coordinated Drug Recommendation through…☆36Updated 2 years ago