BrainBox is a web application that lets you annotate and segment 3D brain imaging data in real time, collaboratively.
☆113May 6, 2026Updated 2 months ago
Alternatives and similar repositories for BrainBox
Users that are interested in BrainBox are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Simple and brief walkthroughs to help grad students/new users complete basic tasks with workbench command and common HCP pipeline output …☆16May 18, 2021Updated 5 years ago
- OpenNeuroLab MetaSearch App☆17Jan 10, 2022Updated 4 years ago
- Applying style transfer to convert multi-modal MRI images to have a T1 like contrast.☆26Apr 18, 2020Updated 6 years ago
- Collaborative vectorial annotation tool for ultra high resolution data.☆47Oct 8, 2023Updated 2 years ago
- Check metadata and visualize neuroimages within VSCode.☆44Apr 29, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Open copy of the CBS Tools software repository☆18Jun 18, 2026Updated last month
- Non-linear warps between common rhesus macaque brain templates☆28Dec 5, 2025Updated 7 months ago
- Website and projects for the OHBM Hackathon in Rome 2019☆86Nov 28, 2022Updated 3 years ago
- For visual commonsense model☆34Apr 12, 2019Updated 7 years ago
- mesh geometry tools☆25Jul 12, 2021Updated 5 years ago
- precon_all surface pipline☆32May 27, 2026Updated last month
- Datasets and notebooks☆13Oct 26, 2016Updated 9 years ago
- Benchmark denoising strategies available from fmriprep.☆17Dec 18, 2025Updated 7 months ago
- A Jupyter Book of everything Brainhack: past, present and future.☆14Jul 1, 2026Updated 3 weeks ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- LibLSL bindings for Node.js☆27May 19, 2019Updated 7 years ago
- Oculus Rift for native Mac OS X☆29Jan 12, 2015Updated 11 years ago
- MSRSegNet: Multi-Scale Residual Network for Semantic Segmentation☆10Aug 9, 2018Updated 7 years ago
- Whole Heart MRI Segmenter based on data from HVSMR MICCAI 2016 Challenge☆11Apr 25, 2020Updated 6 years ago
- A high-performance library for multi-physics simulations and geometric computation☆33Dec 10, 2020Updated 5 years ago
- Notes for Methods for fMRI (PSY 394U), Fall 2019☆11Jan 12, 2020Updated 6 years ago
- Centralized registry of Jitsi rooms and pdfs for OHBM 2020 posters.☆32Jun 25, 2022Updated 4 years ago
- Snakemake + BIDS☆23Apr 1, 2026Updated 3 months ago
- BIDS Application for the Configurable Pipeline for the Analysis of Connectomes (C-PAC)☆15Jul 1, 2026Updated 3 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Towards Turnkey Brain-Computer Interfaces☆13Sep 15, 2017Updated 8 years ago
- Visual programming for neuroimaging analysis☆64Dec 6, 2019Updated 6 years ago
- An MRI analysis toolbox, primarily for laminar analysis☆12Jan 23, 2020Updated 6 years ago
- Modeling and statistical inference on fMRI data in Python☆98Apr 2, 2020Updated 6 years ago
- Python interface for inspecting and running CLI modules (as defined by CommonTK)☆12Oct 23, 2018Updated 7 years ago
- ISBI 2023 - A Registration- and Uncertainty-based Framework for White Matter Tract Segmentation with Only One Annotated Subject☆10Sep 10, 2023Updated 2 years ago
- Calculate AUC based on GWAS summary statistics only☆10Jun 29, 2018Updated 8 years ago
- Mean curvature flow mesh skeleton☆12Nov 18, 2020Updated 5 years ago
- Plugin for openseadragon, which allows you to make a screenshot of your current viewport, with a user specified resolution.☆19Dec 7, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- TTK data examples☆23Updated this week
- Extract hypercolumn to describe images☆16Apr 23, 2026Updated 3 months ago
- Scripts, tools, and documents on creating, parsing, and working with BIDS-structured data sets.☆13Oct 30, 2019Updated 6 years ago
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆76Dec 27, 2025Updated 6 months ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆117Jun 29, 2026Updated 3 weeks ago
- ☆14Feb 12, 2016Updated 10 years ago
- ☆17Dec 16, 2019Updated 6 years ago