Alternatives and similar repositories for DeepPicker-python

Users that are interested in DeepPicker-python are comparing it to the libraries listed below

• cramerlab / warp
  ☆55Updated last year
• cryoem / eman2
  A scientific image processing software suite with a focus on CryoEM and CryoET
  ☆159Updated last week
• kuixu / awesome-cryoem
  A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.
  ☆148Updated 4 years ago
• nysbc / Anisotropy
  These are programs that deal with anisotropy (both resolution and sampling)
  ☆21Updated 7 years ago
• dzyla / MRC_napari_viewer
  Cryo-EM data viewer in napari
  ☆14Updated 4 years ago
• cianfrocco-lab / Automatic-cryoEM-preprocessing
  Tools for user-free preprocessing of cryo-EM datasets
  ☆26Updated 2 years ago
• rsanchezgarc / deepEMhancer
  Deep learning for cryo-EM maps post-processing
  ☆53Updated 2 months ago
• cryoem-uoft / cryosparc-tools
  Python library that enables scripting access to CryoSPARC, a cryo-EM software package.
  ☆39Updated 3 weeks ago
• StochasticAnalytics / emClarity
  ☆41Updated last week
• AlphaCryo4D / AlphaCryo4D
  A deep manifold learning framework for 4D cryo-EM data processing for simultaneous determination of high-resolution structures and dynami…
  ☆16Updated 2 years ago
• tdgrant1 / denss
  Calculate electron density from a solution scattering profile
  ☆36Updated last week
• ccpem / mrcfile
  A Python implementation of the MRC2014 file format
  ☆84Updated 2 months ago
• mbrubake / cryoem-cvpr2015
  Source code to accompany the CVPR 2015 paper "Building Proteins in a Day"
  ☆34Updated 8 years ago
• bpowell122 / tomodrgn
  Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms
  ☆30Updated last month
• anmartinezs / pyseg_system
  De novo analysis for cryo-electron tomography
  ☆22Updated 9 months ago
• teamtomo / starfile
  STAR file I/O in Python
  ☆51Updated 3 weeks ago
• SBC-Utrecht / PyTom
  PyTom software for cryo-tomogram processing
  ☆42Updated 4 months ago
• azazellochg / 3DEM-conventions
  Conventions for 3DEM software packages
  ☆19Updated 3 years ago
• dtegunov / tom
  A somewhat cleaned-up version of the TOM toolbox for electron tomography
  ☆16Updated 8 years ago
• I2PC / scipion
  Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM)
  ☆82Updated 2 years ago
• jianglab / motioncorr
  motion correction for movies recorded using direct electron detectors
  ☆14Updated 8 years ago
• turonova / cryoCAT
  Contextual Analysis Tools for cryoET and subtomogram averaging
  ☆31Updated this week
• tbepler / topaz
  Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled …
  ☆196Updated last week
• haddocking / powerfit
  Rigid body fitting of atomic strucures in cryo-electron microscopy density maps
  ☆21Updated 2 weeks ago
• lamoureux-lab / TorchProteinLibrary
  PyTorch library of layers acting on protein representations
  ☆119Updated last year
• eugenepalovcak / restore
  A CNN for denoising cryo-EM images
  ☆13Updated 5 years ago
• rsanchezgarc / micrograph_cleaner_em
  Cryo-EM micrograph segmentation through deep learning
  ☆23Updated 2 months ago
• jianglab / ctfsimulation
  A CTF Simulation Web App
  ☆12Updated 3 weeks ago
• dzyla / Follow_Relion_gracefully
  New program to follow Relion projects in a browser!
  ☆45Updated 3 months ago
• debbiemarkslab / neural-fingerprint-theano
  Visual Convolutional Neural Graph Fingerprints in Theano/Lasagne
  ☆34Updated 8 years ago