Alternatives and similar repositories for DeepPicker-python

Users that are interested in DeepPicker-python are comparing it to the libraries listed below

• cryoem / eman2
  A scientific image processing software suite with a focus on CryoEM and CryoET
  ☆159Updated last week
• cramerlab / warp
  ☆56Updated last year
• kuixu / awesome-cryoem
  A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.
  ☆150Updated 4 years ago
• dzyla / MRC_napari_viewer
  Cryo-EM data viewer in napari
  ☆14Updated 4 years ago
• nysbc / Anisotropy
  These are programs that deal with anisotropy (both resolution and sampling)
  ☆21Updated 7 years ago
• rsanchezgarc / deepEMhancer
  Deep learning for cryo-EM maps post-processing
  ☆53Updated 3 months ago
• mbrubake / cryoem-cvpr2015
  Source code to accompany the CVPR 2015 paper "Building Proteins in a Day"
  ☆34Updated 8 years ago
• lamoureux-lab / TorchProteinLibrary
  PyTorch library of layers acting on protein representations
  ☆119Updated last year
• tdgrant1 / denss
  Calculate electron density from a solution scattering profile
  ☆37Updated 2 weeks ago
• ccpem / mrcfile
  A Python implementation of the MRC2014 file format
  ☆83Updated 3 weeks ago
• cramerlab / boxnet
  BoxNet implemented in TensorFlow and all current training data
  ☆32Updated 6 years ago
• cianfrocco-lab / Automatic-cryoEM-preprocessing
  Tools for user-free preprocessing of cryo-EM datasets
  ☆27Updated 2 years ago
• KarenUllrich / Pytorch-Backprojection
  This code accompanies "Differentiable probabilistic models of scientific imaging with the Fourier slice theorem", UAI 2019
  ☆37Updated 6 years ago
• cryoem-uoft / cryosparc-tools
  Python library that enables scripting access to CryoSPARC, a cryo-EM software package.
  ☆41Updated last week
• tbepler / topaz
  Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled …
  ☆197Updated last month
• SBC-Utrecht / PyTom
  PyTom software for cryo-tomogram processing
  ☆44Updated 5 months ago
• cxhernandez / molencoder
  Molecular AutoEncoder in PyTorch
  ☆92Updated 5 years ago
• AlphaCryo4D / AlphaCryo4D
  A deep manifold learning framework for 4D cryo-EM data processing for simultaneous determination of high-resolution structures and dynami…
  ☆16Updated 3 years ago
• FrangakisLab / ArtiaX
  ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.
  ☆36Updated 6 months ago
• azazellochg / 3DEM-conventions
  Conventions for 3DEM software packages
  ☆19Updated 3 years ago
• conradry / pytorch-rgn
  Recurrent Geometric Network in Pytorch
  ☆28Updated 4 years ago
• StochasticAnalytics / emClarity
  ☆41Updated last month
• teamtomo / starfile
  STAR file I/O in Python
  ☆51Updated last month
• haddocking / powerfit
  Rigid body fitting of atomic strucures in cryo-electron microscopy density maps
  ☆22Updated this week
• momeara / DeepSEA
  Similarity Ensemble Approach with deep learning substance fingerprints
  ☆61Updated 9 years ago
• olibclarke / coot-trimmings
  Python customizations for the macromolecular model building software Coot.
  ☆21Updated last year
• geoffwoollard / learn_cryoem_math
  ☆125Updated 3 months ago
• turonova / cryoCAT
  Contextual Analysis Tools for cryoET and subtomogram averaging
  ☆31Updated last week
• bpowell122 / tomodrgn
  Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms
  ☆31Updated 2 months ago
• dtegunov / tom
  A somewhat cleaned-up version of the TOM toolbox for electron tomography
  ☆16Updated 8 years ago