Alternatives and similar repositories for Transpicker

Users that are interested in Transpicker are comparing it to the libraries listed below

• Zhang-hn1125 / REST
  ☆16Updated 6 months ago
• IsoNet-cryoET / spIsoNet
  Overcoming the preferred orientation problem in cryoEM with self-supervised deep-learning
  ☆29Updated 3 weeks ago
• swing-research / CryoLithe
  ☆13Updated 2 weeks ago
• yuehuang2023 / cryoNeFEN
  ☆26Updated 5 months ago
• MLI-lab / DeepDeWedge
  Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms
  ☆39Updated 3 weeks ago
• ml-struct-bio / CryoBench
  Diverse and challenging datasets for the heterogeneity problem in cryo-EM
  ☆27Updated last month
• ml-struct-bio / cryofire
  Amortized inference for ab initio heterogeneous cryo-EM reconstruction
  ☆36Updated 2 years ago
• juglab / cryoCARE_pip
  PIP package of cryoCARE
  ☆32Updated last year
• phonchi / Computational-CryoET
  A curated list of awesome computational cryo-ET methods.
  ☆52Updated 6 months ago
• thomasfrosio / emClarity-tutorial
  ☆12Updated 2 years ago
• IsoNet-cryoET / IsoNet
  Self-supervised learning for isotropic cryoET reconstruction
  ☆78Updated 4 months ago
• teamtomo / teamtomo-site-archive
  A collaborative knowledge sharing platform for the cryo-ET community
  ☆20Updated 9 months ago
• mxhulab / cryotrans
  ☆12Updated 10 months ago
• alncat / opusDSD
  deep structural disentanglement
  ☆37Updated 2 weeks ago
• shekshaa / semi-amortized-cryoem
  Pytorch Implementation of Ab-initio Cryo-EM Reconstruction with Semi-Amortized Pose Inference (CryoSPIN), NeurIPS 2024
  ☆11Updated 3 months ago
• logicvay2010 / TomoNet
  TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing
  ☆17Updated this week
• bpowell122 / cryoSRPNT
  Rapidly simulate realistic cryo-EM particles
  ☆15Updated last year
• dtegunov / tom
  A somewhat cleaned-up version of the TOM toolbox for electron tomography
  ☆16Updated 8 years ago
• zhonge / cryodrgn_empiar
  ☆28Updated 4 years ago
• czimaginginstitute / GCtfFind
  GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series
  ☆23Updated this week
• mxhulab / cryopros
  ☆21Updated 3 weeks ago
• SBC-Utrecht / PyTom
  PyTom software for cryo-tomogram processing
  ☆41Updated 3 weeks ago
• carsonpurnell / cryotomosim_CTS
  cryo-EM tomogram simulator
  ☆25Updated 2 months ago
• harshit-gupta-cor / CryoGAN
  ☆15Updated 3 years ago
• phonchi / Computational-CryoEM
  A curated list of awesome computational cryo-EM methods.
  ☆120Updated 2 months ago
• czimaginginstitute / AreTomo2
  ☆47Updated 8 months ago
• teamtomo / starfile
  STAR file I/O in Python
  ☆51Updated 2 months ago
• cbmi-group / DeepETPicker
  ☆29Updated 9 months ago
• 3dem / DynaMight
  Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset
  ☆27Updated 4 months ago
• ml-struct-bio / drgnai
  ☆30Updated 7 months ago