marccasian / KaryML-Framework
Machine Learning (ML) research within medicine and healthcare represents one of the most challenging domains for both engineers and medical specialists. One of the most desired tasks to be accomplished using ML applications is represented by disease detection. A good example of such a task is the detection of genetic abnormalities like Down synd…
☆14Updated 4 years ago
Alternatives and similar repositories for KaryML-Framework:
Users that are interested in KaryML-Framework are comparing it to the libraries listed below
- Cloud-based data annotation tools for biological images☆79Updated last year
- ☆25Updated 5 years ago
- Example notebooks of pyCircos☆29Updated 2 years ago
- Resource of human chromosome schematics & images☆93Updated 6 months ago
- ☆10Updated 2 weeks ago
- Chromosomes from karyotype images☆11Updated 5 years ago
- This project consists of three parts: Random forest model for GC diagnosis and Predict the survival outcomes of GC patient using RSF meth…☆27Updated 4 months ago
- IHC-image analysis workflow☆22Updated 6 years ago
- Python package to export tensorflow models as DeepImageJ bundled models☆17Updated 2 years ago
- Solutions to Programming Assignments for Bioinformatics Algorithms (Part 1) on Coursera.org☆30Updated 11 years ago
- ☆12Updated 4 years ago
- Histology Topography Cytometry Analysis Toolbox☆67Updated last year
- A collection of resources on bioimage analysis and related tools and techniques☆13Updated last year
- A style-aware deep learning model for adaptive cell instance segmentation by contrastive fine-tuning.☆10Updated 11 months ago
- Banding pattern extraction and banding pattern segmentation mask generation for stained banded chromosome images.☆17Updated 2 years ago
- ☆18Updated 6 years ago
- TCGA data downloader☆14Updated 6 years ago
- Modular and scalable whole slide image analysis☆21Updated this week
- A completely automated MATLAB-based trainable image cell segmentation, fluorescence quantification and analysis suite, particularly well …☆33Updated 4 years ago
- Normalization of RNA-seq gene expression☆84Updated 2 months ago
- ☆23Updated last year
- DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images☆24Updated this week
- Detecting methylation using signal-level features from Nanopore sequencing reads of plants☆58Updated 9 months ago
- ☆54Updated 2 years ago
- Course Data Analysis for Life Sciences based on the material by Rafael Irizarry & Mike Love☆14Updated 4 years ago
- Repository to automatically process Fluorescence In Situ Hybridization (FISH) images using Cellpose and BIG-FISH (FISH-quant v2).☆15Updated 3 months ago
- Spatial Transcriptomics Quantification pipeline for 10x Visium and H&E-stained whole slide images☆18Updated last month
- AnnotatorJ: ImageJ plugin for object annotation in 2D☆25Updated 4 years ago
- Spatial omic analysis toolbox for multi-resolution and multi-omic integration using image registration☆94Updated 2 weeks ago
- ☆18Updated 2 years ago