Alternatives and similar repositories for instSeg

Users that are interested in instSeg are comparing it to the libraries listed below

• shruti-jadon / Traumatic-Brain-Lesions-Segmentation
  This project is done in collaboration with Rhode Island Hospital, Department of Diagnostic Imaging.
  ☆25Updated 5 years ago
• asgsaeid / ComboLoss
  ☆20Updated 4 years ago
• junyuchen245 / Unsuprevised_Seg_via_CNN
  An unsupervised (or self-supervised) loss function for binary image segmentation (TensorFlow)
  ☆71Updated 3 years ago
• rdroste / SonoNet_PyTorch
  PyTorch implementation of the SonoNet Ultrasound standard plane detector
  ☆22Updated 4 years ago
• ashawkey / volumentations
  3D volume data augmentation package inspired by albumentations
  ☆80Updated 5 years ago
• ChristophReich1996 / Cell-DETR
  Official and maintained implementation of the paper "Attention-Based Transformers for Instance Segmentation of Cells in Microstructures" …
  ☆103Updated 3 years ago
• sraashis / deepdyn
  pytorch implementation of paper https://www.frontiersin.org/articles/10.3389/fcomp.2020.00035/full
  ☆63Updated 2 years ago
• vliu15 / 3d-brain-tumor-segmentation
  Volumetric MRI brain tumor segmentation using autoencoder regularization
  ☆48Updated 2 years ago
• looooongChen / instance_segmentation_with_pixel_embeddings
  Instance segmentation via deep pixel embedding
  ☆23Updated 4 years ago
• FZJ-INM1-BDA / celldetection
  Scalable Instance Segmentation using PyTorch & PyTorch Lightning.
  ☆142Updated 3 months ago
• TimothyZero / MedVision
  Medical Image Vision Operators, such as RoIAlign, DCNv1, DCNv2 and NMS for both 2/3D images.
  ☆53Updated last year
• sharib-vision / EndoCV2020
  Endoscopy Compter Vision Challenges (EAD2020, EDD2020)
  ☆13Updated 5 years ago
• shirgur / UMIS
  Official PyTorch implementation of "Unsupervised Microvascular Image Segmentation Using an Active Contours Mimicking Neural Network"
  ☆73Updated 4 years ago
• naivete5656 / WSISPDR
  Weakly Supervised Cell Instance Segmentation by Propagating from Detection Response, in MICCAI2019.
  ☆43Updated 4 years ago
• originlake / DSE-skeleton-pruning
  Python implementation of discrete skeleton evolution
  ☆18Updated last year
• koriavinash1 / DigitalHistoPath
  ☆24Updated 2 years ago
• zhoudaxia233 / EfficientUnet
  Keras Implementation of Unet with EfficientNet as encoder
  ☆48Updated 3 years ago
• StevenAZy / PyConvU-Net
  A lightweight and multiscale network for biomedical image segmentation
  ☆10Updated 4 years ago
• LucasFidon / GeneralizedWassersteinDiceLoss
  Official implementation of the Generalized Wasserstein Dice Loss in PyTorch
  ☆80Updated 3 years ago
• PatRyg99 / HausdorffLoss
  Implementation of Hausdorff loss function for DNN learning in segmentation tasks.
  ☆67Updated last year
• amy-tabb / tabb-level-set-segmentation
  A 3D level set method, based on a paper for X-Ray CT segmentation of root systems in WACV 2018.
  ☆25Updated 6 years ago
• computationalpathologygroup / WSICS
  WSICS
  ☆30Updated 6 years ago
• yijingru / KG_Instance_Segmentation
  [MICCAI 2019] Multi-scale Cell Instance Segmentation with Keypoint Graph based Bounding Boxes
  ☆85Updated 5 years ago
• MIDA-group / OralScreen
  Code of paper "A Deep Learning based Pipeline for Efficient Oral Cancer Screening on Whole Slide Images"
  ☆11Updated 3 years ago
• CBICA / HistoReg
  Framework for registration of sequential digitized histology slices
  ☆28Updated 3 years ago
• yijingru / ANCIS-Pytorch
  [Medical Image Analysis 2019] Attentive Neural Cell Instance Segmentation
  ☆47Updated 3 years ago
• mkisantal / backboned-unet
  Build U-Nets for segmentation from pre-trained TorchVision models.
  ☆90Updated 6 years ago
• matjesg / deepflash2
  A deep-learning pipeline for segmentation of ambiguous microscopic images.
  ☆63Updated 3 months ago
• martinmenten / skeletonization-for-gradient-based-optimization
  ☆53Updated last year
• tueimage / gryds
  A Python package for geometric transformations of images for data augmentation in deep learning
  ☆67Updated 6 years ago