looooongChen / instSeg
Instance segmtnation via pixel embedding learning
☆14Updated last year
Alternatives and similar repositories for instSeg:
Users that are interested in instSeg are comparing it to the libraries listed below
- Python implementation of discrete skeleton evolution☆18Updated last year
- This project is done in collaboration with Rhode Island Hospital, Department of Diagnostic Imaging.☆24Updated 4 years ago
- ☆19Updated 4 years ago
- Dataset: landmarks for registration of histology images☆32Updated 4 years ago
- An unsupervised (or self-supervised) loss function for binary image segmentation (TensorFlow)☆69Updated 3 years ago
- Official PyTorch implementation of "Unsupervised Microvascular Image Segmentation Using an Active Contours Mimicking Neural Network"☆73Updated 3 years ago
- For cell segmentation and tracking.☆36Updated 4 years ago
- EfficientUnet☆9Updated 4 years ago
- Implementation of Hausdorff loss function for DNN learning in segmentation tasks.☆63Updated 7 months ago
- ☆21Updated 6 years ago
- ☆13Updated 5 years ago
- some loss functions of image segmentation☆65Updated 4 years ago
- [Medical Image Analysis 2019] Attentive Neural Cell Instance Segmentation☆46Updated 3 years ago
- An unofficial pytorch implementation for "Learning Active Contour Models for Medical Image Segmentation" by Chen, Xu, et al.☆75Updated last month
- This code was submitted to Cell Tracking Challenge, ISBI 2020.☆14Updated 3 years ago
- A 3D level set method, based on a paper for X-Ray CT segmentation of root systems in WACV 2018.☆25Updated 5 years ago
- Comparison of three U-Net architectures on the ISBI Challenge dataset. Keras/Tensorflow☆18Updated 4 years ago
- Volumetric MRI brain tumor segmentation using autoencoder regularization☆48Updated last year
- Build U-Nets for segmentation from pre-trained TorchVision models.☆90Updated 5 years ago
- Official implementation of the Generalized Wasserstein Dice Loss in PyTorch☆80Updated 2 years ago
- Instance segmentation via deep pixel embedding☆23Updated 4 years ago
- official implementation of the PatchPerPix instance segmentation method☆30Updated last year
- Multiclass semantic segmentation using U-Net architecture combined with strong image augmentation☆58Updated 4 years ago
- Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images☆112Updated last year
- Temporarily removed for anonymization☆21Updated 3 years ago
- Official PyTorch implementation of "End to End Trainable Active Contours via Differentiable Rendering"☆93Updated 5 years ago
- Deep learning image registration library for PyTorch☆64Updated 3 years ago
- Unet,Unet++,FPN,DAF implementations for liver segmentation☆15Updated 5 years ago
- Framework for registration of sequential digitized histology slices☆28Updated 2 years ago
- sagieppel / Classification-of-object-in-a-specific-image-region-using-a-convolutional-neural-net-with-ROI-mask-aClassification of object in a specific image region using a convolutional neural net with ROI mask as input☆26Updated last year