looooongChen / instSegLinks
Instance segmtnation via pixel embedding learning
☆14Updated 2 years ago
Alternatives and similar repositories for instSeg
Users that are interested in instSeg are comparing it to the libraries listed below
Sorting:
- This project is done in collaboration with Rhode Island Hospital, Department of Diagnostic Imaging.☆25Updated 5 years ago
- Comparison of three U-Net architectures on the ISBI Challenge dataset. Keras/Tensorflow☆19Updated 5 years ago
- Endoscopy Compter Vision Challenges (EAD2020, EDD2020)☆13Updated 5 years ago
- ☆20Updated 5 years ago
- PyTorch implementation of the SonoNet Ultrasound standard plane detector☆22Updated 5 years ago
- A 3D level set method, based on a paper for X-Ray CT segmentation of root systems in WACV 2018.☆25Updated 6 years ago
- Build U-Nets for segmentation from pre-trained TorchVision models.☆91Updated 6 years ago
- Volumetric MRI brain tumor segmentation using autoencoder regularization☆48Updated 2 years ago
- An unsupervised (or self-supervised) loss function for binary image segmentation (TensorFlow)☆71Updated 4 years ago
- Dataset: landmarks for registration of histology images☆34Updated 5 years ago
- An open source online platform for collaborative image labeling of almost everything☆62Updated 2 weeks ago
- This repository presents a couple of approaches to the problem of multi-view image classification. I faced this challenge during a hackat…☆63Updated 5 years ago
- Official and maintained implementation of the paper "Attention-Based Transformers for Instance Segmentation of Cells in Microstructures" …☆107Updated 3 years ago
- Temporarily removed for anonymization☆20Updated 4 years ago
- Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images☆127Updated last year
- GUI for MICCAI 2019 "Interactive deep editing framework for medical image segmentation" (One-click medical image segmentation tool!)☆12Updated 6 years ago
- Keras Implementation of Unet with EfficientNet as encoder☆48Updated 3 years ago
- Official implementation of the Generalized Wasserstein Dice Loss in PyTorch☆80Updated 3 years ago
- sagieppel / Classification-of-object-in-a-specific-image-region-using-a-convolutional-neural-net-with-ROI-mask-aClassification of object in a specific image region using a convolutional neural net with ROI mask as input☆27Updated 2 years ago
- Instance segmentation via deep pixel embedding☆23Updated 5 years ago
- EfficientUnet☆10Updated 5 years ago
- 3D volume data augmentation package inspired by albumentations☆81Updated 6 years ago
- MPM: Joint Representation of Motion and Position Map for Cell Tracking☆41Updated 4 years ago
- Medical Image Vision Operators, such as RoIAlign, DCNv1, DCNv2 and NMS for both 2/3D images.☆54Updated last year
- Python implementation of discrete skeleton evolution☆20Updated 2 years ago
- WSICS☆30Updated 6 years ago
- A deep-learning pipeline for segmentation of ambiguous microscopic images.☆63Updated 8 months ago
- pytorch implementation of paper https://www.frontiersin.org/articles/10.3389/fcomp.2020.00035/full☆63Updated 3 years ago
- Segment anything with our Napari integration of Meta AI's Segment Anything Model (SAM)!☆243Updated last year
- Multi-Planar UNet for autonomous segmentation of 3D medical images☆196Updated 2 years ago