mlbernauer / drugstandardsLinks
Python tools for standardizing drug names to generic names.
☆24Updated 2 years ago
Alternatives and similar repositories for drugstandards
Users that are interested in drugstandards are comparing it to the libraries listed below
Sorting:
- ☆13Updated 10 years ago
- a Python tool to extract and structure numeric lab test comparison statements from text☆22Updated 2 years ago
- Clinical trial designs and methods in Python☆22Updated 9 years ago
- Classes for ClinicalTrials.gov related projects☆47Updated 6 years ago
- cTAKES Python API interface for the Default Clinical Pipeline☆15Updated 7 years ago
- Download and load MIMIC-III into a PostgreSQL DB on an Ubuntu VM☆10Updated 9 years ago
- ☆23Updated 3 years ago
- Python 3 classes to handle clinical trial data from ClinicalTrials.gov and other services☆15Updated 10 years ago
- Downloader, preprocessor, parser and deduper for NIH and NSF grants☆22Updated 7 years ago
- ☆11Updated 4 years ago
- python package for performing deduplication using flexible text matching and cleaning in pandas dataframe☆25Updated 5 years ago
- Improving Public Access to Aggregate Content of ClinicalTrials.gov☆165Updated 2 months ago
- Basic Python 3 tools to interact with UMLS lexica☆124Updated 6 years ago
- Visualization of electronic medical records or other sequence event data.☆93Updated 6 years ago
- An implementation of the HCC Risk Adjustment Algorithm in Python☆64Updated 5 years ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.☆56Updated last week
- Open Targets Library ETL Pipeline | Apache Beam☆16Updated 4 years ago
- Introduction to MIMIC-III, the Critical Care Database☆86Updated 8 years ago
- An NLP pipeline for COVID-19 surveillance used in the Department of Veterans Affairs Biosurveillance.☆16Updated 3 years ago
- Materials for the workshop Advanced Text Analysis with SpaCy and Scikit-Learn, given at NYU during NYCDH Week 2017, at PyData NYC in Nov.…☆83Updated 3 years ago
- Clinical NLP workshop for ODSC☆39Updated 6 years ago
- Open or Easy Access Clinical Data Sources for Biomedical Research☆178Updated 8 years ago
- An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/☆108Updated last year
- Machine-learning based pipeline relying on LambdaMART currently used in PubMed for relevance (Best Match) searches☆43Updated 7 years ago
- Cohort extractor tool which can generate dummy data, or real data against OpenSAFELY-compliant research databases☆37Updated 6 months ago
- Data and basic scrubbing of the FDA Adverse Event Reporting System data☆14Updated 10 years ago
- Simple python parser for MEDLINE, Pubmed OA affiliation string☆37Updated 4 years ago
- Automatically exported from code.google.com/p/negex☆36Updated 3 years ago
- Sample code that demonstrates the use of the NCBO REST services☆43Updated last year
- Code for the old version of BioMedICUS, for the new version see the biomedicus3 repository.☆44Updated 2 years ago