Alternatives and similar repositories for BIO_594_2023:

Users that are interested in BIO_594_2023 are comparing it to the libraries listed below

• thomasblankers / popgen
  A collection of scripts I wrote when doing population genetics: calculate GC content, perform the McDonald-Kreitman test, calculate Tajim…
  ☆9Updated last year
• Rowena-h / FusariumLifestyles
  Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣
  ☆11Updated 2 years ago
• oeco28 / Cacao_Genomics
  This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes
  ☆11Updated 6 years ago
• melop / killigenomics
  Killifish genomics scripts
  ☆12Updated 4 years ago
• xuechantian / Plant-LncRNA-pipline
  ☆12Updated 2 months ago
• galikbence / genome_annotation
  Pipeline for eukaryotic genome annotation based on external evidences
  ☆11Updated 2 years ago
• ben-laufer / Tag-seq
  3’ Tag RNA-seq pipeline (Work in progress)
  ☆10Updated 4 years ago
• songtaogui / pan-Zea_utilities
  the miscellaneous analysis scripts used in the research of pan-Zea genome and genetics
  ☆17Updated 2 years ago
• hhwagner1 / LandGenCourse_book
  ☆12Updated last year
• eacooper400 / GWAS_Pipelines
  Instructions and helpful R code for Running GEMMA and GAPIT
  ☆12Updated 7 years ago
• ZhaoTingzju / GWAS_script
  Working on cotton resequencing
  ☆11Updated 4 years ago
• yexinhai / genomics-analysis-pipeline
  Some useful bioinformatics pipelines for genomics analysis
  ☆14Updated 3 years ago
• zjnolen / PopGLen
  Bioinformatics pipeline to process whole genome resequencing data and perform genotype likelihood based population genomic analyses using…
  ☆11Updated last month
• Yafei-Guo-coder / DumpNice
  Codes for Vmap1.1 and Vmap3
  ☆10Updated 5 months ago
• evodify / genotype-files-manipulations
  Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.
  ☆10Updated 4 years ago
• IBEXCluster / HPC-GVCW
  Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.
  ☆12Updated 11 months ago
• jdalapicolla / LanGen_pipeline_version2
  Scripts in R for Landscape Genomics Analyses v.2
  ☆10Updated 2 years ago
• zhaoshuoxp / lncRNA
  De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk
  ☆10Updated last year
• GP2-TNC-WG / GP2-Beginner-Bioinformatics-for-PD-Genetics
  ☆12Updated 2 years ago
• UPSCb / UPSCb-common
  Common scripts
  ☆14Updated last week
• YinYuan-001 / muntjac_code
  ☆10Updated 3 years ago
• rojaff / LanGen_pipeline
  Suit of R-scripts to perform landscape genomic analyses
  ☆13Updated 4 years ago
• mahajrod / MAVR
  various bioinformatic instruments
  ☆8Updated 2 months ago
• KamilSJaron / generic_genomics
  small scripts, functions or bits of code for parsing genomic data
  ☆14Updated 2 years ago
• xuebozhao16 / VMap1.1-Population_history_of_wheats
  Some codes about evolutionary history of wheats
  ☆8Updated last year
• ShawnWx2019 / emmax-pipeline
  GWAS analysis process based on EMMAX software
  ☆11Updated last year
• fanofmeasurement / Rlectures
  ☆10Updated last year
• yukaiquan / biotools
  I often use some of the self-written programs.
  ☆15Updated last month
• schmitzlab / Widespread-Long-range-Cis-Regulatory-Elements-in-the-Maize-Genome
  scripts used for processing and analyzing data in the article.
  ☆13Updated 5 years ago
• caasivfbioinfo / Bol_pangenome
  ☆14Updated last year