A transformer model for picking protein particles in cryo-EM images
☆54Jan 12, 2025Updated last year
Alternatives and similar repositories for CryoTransformer
Users that are interested in CryoTransformer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A dataset of labeled virus particles in cryo-EM micrographs (images) for training and testing machine learning methods of virus particle …☆26Jan 27, 2026Updated 2 months ago
- The programs of creating cryo-EM particle picking datasets☆81Sep 14, 2023Updated 2 years ago
- Customized foundational image segmentation models for picking protein particles in cryo-EM images☆22Jan 7, 2026Updated 3 months ago
- A 2D particle picker for cryoEM micrographs☆10Nov 26, 2024Updated last year
- Pytorch Implementation of CryoSPIN, NeurIPS 2024☆17Jan 30, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Detect and erase gold fiducials in cryo-EM images☆15May 27, 2025Updated 10 months ago
- structural heterogeneity analysis and reconstruction for cryo-ET subtomogram☆10Apr 4, 2026Updated 2 weeks ago
- Diverse and challenging datasets for the heterogeneity problem in cryo-EM☆41Jan 14, 2026Updated 3 months ago
- ☆38Dec 11, 2024Updated last year
- deep structural disentanglement☆42Apr 7, 2026Updated last week
- ☆26Jun 25, 2025Updated 9 months ago
- ☆14Apr 10, 2026Updated last week
- Neural multiclass ab initio reconstruction for cryo-EM.☆13Dec 5, 2024Updated last year
- A comprehensive foundation model for cryo-EM image processing☆63Mar 17, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Half-synthetic cryoEM micrograph generator that projects pdbs>mrcs onto existing buffer cryoEM micrographs☆18Oct 25, 2024Updated last year
- Live processing and real time reconstruction of cryo☆51Mar 18, 2026Updated last month
- PyTom software for cryo-tomogram processing☆45Jan 5, 2026Updated 3 months ago
- ☆60Apr 7, 2026Updated last week
- ☆16Aug 17, 2023Updated 2 years ago
- Command-line tools for protein structure analysis: convert PDB, mmCIF, PDBML, or XYZR files into atomic sphere data, then compute volumes…☆15Updated this week
- A curated list of awesome computational cryo-EM methods.☆147Nov 23, 2025Updated 4 months ago
- Emap2sec+: Detecting Protein and DNA/RNA Structures in Cryo-EM Maps of Intermediate Resolution Using Deep Learning☆19Nov 21, 2025Updated 4 months ago
- CryoREAD: a computational tool using deep learning to automatically build full DNA/RNA atomic structure from cryo-EM map.☆32Oct 14, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆13Oct 25, 2025Updated 5 months ago
- The repository hosting example notebooks for 2024 CZII cryoET machine learning challenge☆37Nov 8, 2024Updated last year
- Simulation of cryo-EM ensemble data from atomic models of molecules exhibiting continuous motions☆14Jan 5, 2022Updated 4 years ago
- A CTF Simulation Web App☆13Aug 6, 2025Updated 8 months ago
- ☆15Nov 3, 2021Updated 4 years ago
- Python programs for electron microscopy☆136Jan 15, 2026Updated 3 months ago
- ☆49Apr 10, 2026Updated last week
- EM-GAN is a computational tool, which enables capturing protein structure information from cryo-EM maps more effectively than raw maps. I…☆17Mar 4, 2025Updated last year
- ☆37Apr 11, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Automatic atomic model building program for cryo-EM maps☆163Apr 1, 2026Updated 2 weeks ago
- Masked Autoencoder Guided Segmentation at Pixel Resolution☆17Oct 3, 2023Updated 2 years ago
- ☆43Apr 10, 2026Updated last week
- ☆38Feb 24, 2025Updated last year
- Amortized inference for ab initio heterogeneous cryo-EM reconstruction☆42Apr 11, 2023Updated 3 years ago
- Macromolecules Localization and Identification in 3D Cellular Cryo-Electron Tomograms☆10Aug 5, 2024Updated last year
- From cryo-EM density map to atomic structure☆30Aug 17, 2025Updated 8 months ago