jianlin-cheng / CryoTransformer
A transformer model for picking protein particles in cryo-EM images
☆46Updated 3 months ago
Alternatives and similar repositories for CryoTransformer:
Users that are interested in CryoTransformer are comparing it to the libraries listed below
- The programs of creating cryo-EM particle picking datasets☆70Updated last year
- deep structural disentanglement☆37Updated this week
- Diverse and challenging datasets for the heterogeneity problem in cryo-EM☆27Updated 2 weeks ago
- A curated list of awesome computational cryo-ET methods.☆52Updated 6 months ago
- A comprehensive foundation model for cryo-EM image processing☆19Updated last month
- Overcoming the preferred orientation problem in cryoEM with self-supervised deep-learning☆28Updated last week
- Automatic atomic model building program for cryo-EM maps☆136Updated 2 months ago
- Rapidly simulate realistic cryo-EM particles☆15Updated last year
- Amortized inference for ab initio heterogeneous cryo-EM reconstruction☆36Updated 2 years ago
- ☆30Updated 6 months ago
- EM-GAN is a computational tool, which enables capturing protein structure information from cryo-EM maps more effectively than raw maps. I…☆14Updated last month
- The Swiss Army Knife for Editing Relion .STAR Files☆20Updated 9 months ago
- The SIRM-RELION is designed to mitigate the preferred-orientation induced map distortion.☆14Updated 8 months ago
- From cryo-EM density map to atomic structure☆29Updated 4 months ago
- ☆21Updated last week
- Tools for interfacing between cryoSPARC and Relion☆17Updated last year
- ☆12Updated 2 years ago
- Half-synthetic cryoEM micrograph generator that projects pdbs>mrcs onto existing buffer cryoEM micrographs☆17Updated 6 months ago
- New script to follow Relion projects in a browser!☆39Updated 11 months ago
- Utilities to help cryoEM data analysis☆20Updated 3 years ago
- Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset☆26Updated 4 months ago
- Python scripts for easy RELION STAR file manipulation.☆23Updated last week
- A curated list of awesome computational cryo-EM methods.☆118Updated last month
- ☆28Updated 8 months ago
- Contextual Analysis Tools for cryoET and subtomogram averaging☆26Updated this week
- cryo-EM tomogram simulator☆25Updated 2 months ago
- Customized foundational image segmentation models for picking protein particles in cryo-EM images☆18Updated 2 months ago
- DeepMainmast☆12Updated 8 months ago
- Pytorch Implementation of Ab-initio Cryo-EM Reconstruction with Semi-Amortized Pose Inference (CryoSPIN), NeurIPS 2024☆11Updated 2 months ago
- Conventions for 3DEM software packages☆19Updated 3 years ago