BioinfoMachineLearning / cryoppp
The programs of creating cryo-EM particle picking datasets
☆69Updated last year
Alternatives and similar repositories for cryoppp:
Users that are interested in cryoppp are comparing it to the libraries listed below
- A transformer model for picking protein particles in cryo-EM images☆43Updated last month
- Diverse and challenging datasets for the heterogeneity problem in cryo-EM☆24Updated last month
- Amortized inference for ab initio heterogeneous cryo-EM reconstruction☆36Updated last year
- A dataset of labeled virus particles in cryo-EM micrographs (images) for training and testing machine learning methods of virus particle …☆26Updated last year
- ☆27Updated 4 years ago
- A curated list of awesome computational cryo-ET methods.☆46Updated 4 months ago
- Rapidly simulate realistic cryo-EM particles☆14Updated last year
- Customized foundational image segmentation models for picking protein particles in cryo-EM images☆15Updated last year
- ☆25Updated 2 months ago
- A curated list of awesome computational cryo-EM methods.☆110Updated 3 months ago
- Overcoming the preferred orientation problem in cryoEM with self-supervised deep-learning☆27Updated 3 months ago
- Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms☆39Updated last month
- Sparse Fourier Backpropagation in Cryo-EM Reconstruction☆11Updated last year
- A collaborative knowledge sharing platform for the cryo-ET community☆20Updated 6 months ago
- Automatic atomic model building program for cryo-EM maps☆130Updated this week
- deep structural disentanglement☆35Updated this week
- cryo-EM tomogram simulator☆24Updated 3 weeks ago
- membrane segmentation in 3D for cryo-ET☆61Updated last month
- ☆28Updated 4 months ago
- cryo-ET particle picking by representation and metric learning☆34Updated this week
- ☆22Updated this week
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆24Updated last month
- ☆27Updated 6 months ago
- ☆16Updated 4 months ago
- STAR file I/O in Python☆48Updated last month
- Half-synthetic cryoEM micrograph generator that projects pdbs>mrcs onto existing buffer cryoEM micrographs☆16Updated 3 months ago
- A comprehensive foundation model for cryo-EM image processing☆15Updated last month
- ☆43Updated 2 months ago
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆17Updated last month
- Cryo-EM micrograph segmentation through deep learning☆20Updated 2 months ago